Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 AL671710.1-201ENST00000610245 2349 ntBASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 MIR1233-2-201ENST00000408138 82 ntBASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 MIR1233-1-201ENST00000408722 82 ntBASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 MIR3687-2-201ENST00000577708 61 ntBASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 MIR4469-201ENST00000583919 79 ntBASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 MIR3687-1-201ENST00000614492 61 ntBASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 AL391256.1-201ENST00000443260 1855 ntBASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ARHGEF39Q8N4T4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 AC002056.1-201ENST00000395613 760 ntBASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 ACTG1P14-201ENST00000446382 1122 ntBASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 AL031055.1-201ENST00000606362 631 ntBASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 AP001350.2-201ENST00000625104 1094 ntBASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 LTB4R2-202ENST00000528054 3092 ntBASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 AC022211.2-201ENST00000585075 2527 ntBASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
ARHGEF39Q8N4T4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms