Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.28■□□□□ 0.84
SLX4Q8IY92 AC061975.2-201ENST00000581722 295 ntBASIC20.28■□□□□ 0.84
SLX4Q8IY92 AC099568.2-201ENST00000609194 695 ntBASIC20.28■□□□□ 0.84
SLX4Q8IY92 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.28■□□□□ 0.84
SLX4Q8IY92 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLX4Q8IY92 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLX4Q8IY92 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLX4Q8IY92 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLX4Q8IY92 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLX4Q8IY92 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLX4Q8IY92 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLX4Q8IY92 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.28■□□□□ 0.84
SLX4Q8IY92 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.28■□□□□ 0.84
SLX4Q8IY92 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLX4Q8IY92 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLX4Q8IY92 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.27■□□□□ 0.84
SLX4Q8IY92 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.27■□□□□ 0.84
SLX4Q8IY92 AL512343.1-201ENST00000605837 169 ntBASIC20.27■□□□□ 0.84
SLX4Q8IY92 AL109936.8-201ENST00000641772 604 ntBASIC20.27■□□□□ 0.84
SLX4Q8IY92 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.27■□□□□ 0.84
SLX4Q8IY92 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLX4Q8IY92 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.27■□□□□ 0.84
SLX4Q8IY92 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLX4Q8IY92 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.27■□□□□ 0.84
SLX4Q8IY92 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLX4Q8IY92 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLX4Q8IY92 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.27■□□□□ 0.84
SLX4Q8IY92 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLX4Q8IY92 SNX33P1-201ENST00000592116 1762 ntBASIC20.27■□□□□ 0.84
SLX4Q8IY92 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.27■□□□□ 0.84
SLX4Q8IY92 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLX4Q8IY92 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLX4Q8IY92 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLX4Q8IY92 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.27■□□□□ 0.84
SLX4Q8IY92 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SLX4Q8IY92 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.27■□□□□ 0.84
SLX4Q8IY92 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLX4Q8IY92 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SLX4Q8IY92 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SLX4Q8IY92 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.27■□□□□ 0.84
SLX4Q8IY92 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLX4Q8IY92 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SLX4Q8IY92 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.27■□□□□ 0.84
SLX4Q8IY92 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.27■□□□□ 0.83
SLX4Q8IY92 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SLX4Q8IY92 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.27■□□□□ 0.83
SLX4Q8IY92 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLX4Q8IY92 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
SLX4Q8IY92 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SLX4Q8IY92 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SLX4Q8IY92 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.26■□□□□ 0.83
SLX4Q8IY92 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLX4Q8IY92 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.26■□□□□ 0.83
SLX4Q8IY92 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLX4Q8IY92 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SLX4Q8IY92 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLX4Q8IY92 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLX4Q8IY92 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
SLX4Q8IY92 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.26■□□□□ 0.83
SLX4Q8IY92 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.26■□□□□ 0.83
SLX4Q8IY92 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLX4Q8IY92 USP32P1-208ENST00000506594 1164 ntBASIC20.26■□□□□ 0.83
SLX4Q8IY92 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.26■□□□□ 0.83
SLX4Q8IY92 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.26■□□□□ 0.83
SLX4Q8IY92 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLX4Q8IY92 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLX4Q8IY92 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.26■□□□□ 0.83
SLX4Q8IY92 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.26■□□□□ 0.83
SLX4Q8IY92 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLX4Q8IY92 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.26■□□□□ 0.83
SLX4Q8IY92 REXO1L6P-201ENST00000603433 1515 ntBASIC20.26■□□□□ 0.83
SLX4Q8IY92 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLX4Q8IY92 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SLX4Q8IY92 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.25■□□□□ 0.83
SLX4Q8IY92 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLX4Q8IY92 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.25■□□□□ 0.83
SLX4Q8IY92 SLC25A6P5-201ENST00000435663 894 ntBASIC20.25■□□□□ 0.83
SLX4Q8IY92 AC234783.1-201ENST00000441761 496 ntBASIC20.25■□□□□ 0.83
SLX4Q8IY92 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.25■□□□□ 0.83
SLX4Q8IY92 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.25■□□□□ 0.83
SLX4Q8IY92 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.25■□□□□ 0.83
SLX4Q8IY92 AC123567.1-201ENST00000548294 1261 ntBASIC20.25■□□□□ 0.83
SLX4Q8IY92 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SLX4Q8IY92 AP005482.1-201ENST00000563722 1273 ntBASIC20.25■□□□□ 0.83
SLX4Q8IY92 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.25■□□□□ 0.83
SLX4Q8IY92 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.25■□□□□ 0.83
SLX4Q8IY92 MIR6775-201ENST00000617557 69 ntBASIC20.25■□□□□ 0.83
SLX4Q8IY92 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.25■□□□□ 0.83
SLX4Q8IY92 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLX4Q8IY92 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLX4Q8IY92 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLX4Q8IY92 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SLX4Q8IY92 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLX4Q8IY92 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLX4Q8IY92 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLX4Q8IY92 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.25■□□□□ 0.83
SLX4Q8IY92 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLX4Q8IY92 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.25■□□□□ 0.83
SLX4Q8IY92 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SLX4Q8IY92 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms