Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 SPDYE22P-201ENST00000582158 798 ntBASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 AL035456.1-201ENST00000456064 1369 ntBASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 FOXO1B-201ENST00000504678 1527 ntBASIC17.98■□□□□ 0.47
NPAS4Q8IUM7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 GK-202ENST00000378941 458 ntTSL 3 BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 AL353705.2-201ENST00000428243 662 ntBASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 AL662799.1-202ENST00000614205 422 ntBASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 TUBB8P12-201ENST00000308911 1335 ntBASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 TUBB7P-202ENST00000428444 1305 ntBASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 TUBB8P7-204ENST00000567960 1332 ntBASIC17.97■□□□□ 0.47
NPAS4Q8IUM7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 AC134043.2-201ENST00000624206 2238 ntBASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 AC124947.2-201ENST00000547118 1133 ntBASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 AC025048.6-201ENST00000634326 1161 ntBASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS4Q8IUM7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms