Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 MIR1233-2-201ENST00000408138 82 ntBASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 MIR1233-1-201ENST00000408722 82 ntBASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 C20orf181-201ENST00000623918 480 ntBASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRTM4Q86VH4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 HMGA1P7-201ENST00000406908 502 ntBASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 AC112482.1-201ENST00000492080 688 ntBASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 AP002490.2-201ENST00000524791 560 ntBASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
LRRTM4Q86VH4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 FAM58CP-201ENST00000435741 640 ntBASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 ALG1L5P-201ENST00000482043 771 ntBASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 AC005829.1-201ENST00000570002 483 ntBASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 AL078644.1-201ENST00000609881 752 ntBASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRTM4Q86VH4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms