Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 EGFEM1P-202ENST00000431685 1563 ntBASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RFWD3Q6PCD5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD3Q6PCD5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFWD3Q6PCD5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 BX842568.4-201ENST00000421222 227 ntBASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 AC010507.1-201ENST00000633895 436 ntBASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 AC092865.6-201ENST00000642101 219 ntBASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD3Q6PCD5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 AC105020.1-201ENST00000435356 2205 ntBASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RFWD3Q6PCD5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms