Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNKSR3Q6P9H4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.02■□□□□ 0.47
CNKSR3Q6P9H4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.02■□□□□ 0.47
CNKSR3Q6P9H4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 BTBD7P1-201ENST00000447253 1453 ntBASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 AC108860.2-201ENST00000562760 2183 ntBASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 AL354751.1-201ENST00000412768 1863 ntBASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 DFFBP1-201ENST00000433250 979 ntBASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 RNA5SP410-201ENST00000516285 106 ntBASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 ZNF890P-202ENST00000530367 1156 ntBASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 AL133215.2-201ENST00000609242 977 ntBASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNKSR3Q6P9H4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 AL080243.2-201ENST00000418783 582 ntBASIC18■□□□□ 0.47
CNKSR3Q6P9H4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 GIMAP3P-201ENST00000495150 836 ntBASIC18■□□□□ 0.47
CNKSR3Q6P9H4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 AL079307.3-201ENST00000556114 283 ntBASIC18■□□□□ 0.47
CNKSR3Q6P9H4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 AL391825.1-201ENST00000457671 1364 ntBASIC18■□□□□ 0.47
CNKSR3Q6P9H4 HCG11-201ENST00000411553 5696 ntBASIC18■□□□□ 0.47
CNKSR3Q6P9H4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18■□□□□ 0.47
CNKSR3Q6P9H4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 AC087499.6-201ENST00000411576 835 ntBASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.99■□□□□ 0.47
CNKSR3Q6P9H4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms