Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 AC093458.2-201ENST00000623150 629 ntBASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM53Q6P2H8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 UPK3BP1-201ENST00000428678 509 ntBASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 KRT8P47-201ENST00000604727 1398 ntBASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 AL137784.3-201ENST00000623858 2288 ntBASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TMEM53Q6P2H8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM53Q6P2H8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM53Q6P2H8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
TMEM53Q6P2H8 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.58■□□□□ 0.09
TMEM53Q6P2H8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM53Q6P2H8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM53Q6P2H8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
TMEM53Q6P2H8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM53Q6P2H8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 AC246785.2-201ENST00000432512 513 ntBASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 DDX43P3-201ENST00000441064 443 ntBASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 AP002414.4-201ENST00000589764 1148 ntBASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 Z69720.1-201ENST00000601483 472 ntBASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM53Q6P2H8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms