Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 MTND6P24-201ENST00000440466 518 ntBASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 TP53TG3HP-202ENST00000569755 579 ntBASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 AL132655.2-201ENST00000596276 594 ntBASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 TEX28P1-201ENST00000613479 1221 ntBASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 TEX28P2-201ENST00000617764 1221 ntBASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 AC007541.1-201ENST00000570282 1469 ntBASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD4Q5XG99 AC087499.5-201ENST00000452760 1342 ntBASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 AC016396.2-201ENST00000562575 1417 ntBASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 AC004408.2-201ENST00000623613 2777 ntBASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 SLC25A6P5-201ENST00000435663 894 ntBASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 AC140912.1-201ENST00000577171 1054 ntBASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 AL589739.1-201ENST00000607720 493 ntBASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD4Q5XG99 BICD1-207ENST00000551848 1962 ntBASIC16.46■□□□□ 0.22
LYSMD4Q5XG99 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
LYSMD4Q5XG99 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 HLA-V-201ENST00000429037 534 ntBASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 GPR53P-205ENST00000457298 1084 ntBASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.45■□□□□ 0.22
LYSMD4Q5XG99 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms