Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 KRT8P19-201ENST00000551916 1455 ntBASIC14.48□□□□□ -0.09
LRRK2Q5S007 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 HINT2P1-201ENST00000419438 481 ntBASIC14.48□□□□□ -0.09
LRRK2Q5S007 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.48□□□□□ -0.09
LRRK2Q5S007 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LRRK2Q5S007 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRK2Q5S007 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 AL512361.1-201ENST00000554200 418 ntBASIC14.47□□□□□ -0.09
LRRK2Q5S007 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 AL022328.1-201ENST00000610050 478 ntBASIC14.47□□□□□ -0.09
LRRK2Q5S007 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRK2Q5S007 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRK2Q5S007 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRK2Q5S007 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRK2Q5S007 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRK2Q5S007 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LRRK2Q5S007 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.46□□□□□ -0.09
LRRK2Q5S007 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRK2Q5S007 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRK2Q5S007 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRK2Q5S007 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRK2Q5S007 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRK2Q5S007 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRK2Q5S007 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LRRK2Q5S007 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
LRRK2Q5S007 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRK2Q5S007 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.46□□□□□ -0.09
LRRK2Q5S007 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRK2Q5S007 MBP-227ENST00000526111 581 ntTSL 4 BASIC14.46□□□□□ -0.09
LRRK2Q5S007 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRK2Q5S007 RN7SL828P-201ENST00000607615 303 ntBASIC14.46□□□□□ -0.09
LRRK2Q5S007 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.46□□□□□ -0.09
LRRK2Q5S007 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
LRRK2Q5S007 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.46□□□□□ -0.09
LRRK2Q5S007 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRK2Q5S007 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.46□□□□□ -0.09
LRRK2Q5S007 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRK2Q5S007 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LRRK2Q5S007 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRK2Q5S007 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.46□□□□□ -0.1
LRRK2Q5S007 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
LRRK2Q5S007 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.1
LRRK2Q5S007 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRK2Q5S007 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.46□□□□□ -0.1
LRRK2Q5S007 AL008638.5-201ENST00000623814 1298 ntBASIC14.46□□□□□ -0.1
LRRK2Q5S007 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.46□□□□□ -0.1
LRRK2Q5S007 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LRRK2Q5S007 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LRRK2Q5S007 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
LRRK2Q5S007 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms