Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.4□□□□□ -0.1
EFNB3Q15768 AC109635.5-201ENST00000533593 962 ntBASIC14.4□□□□□ -0.1
EFNB3Q15768 AC087641.1-201ENST00000557561 1021 ntBASIC14.4□□□□□ -0.1
EFNB3Q15768 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.4□□□□□ -0.1
EFNB3Q15768 MIR3909-201ENST00000579518 119 ntBASIC14.4□□□□□ -0.1
EFNB3Q15768 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
EFNB3Q15768 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.4□□□□□ -0.1
EFNB3Q15768 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.4□□□□□ -0.1
EFNB3Q15768 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNB3Q15768 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
EFNB3Q15768 CROCCP2-202ENST00000412962 2773 ntBASIC14.39□□□□□ -0.11
EFNB3Q15768 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.39□□□□□ -0.11
EFNB3Q15768 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.39□□□□□ -0.11
EFNB3Q15768 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.39□□□□□ -0.11
EFNB3Q15768 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.39□□□□□ -0.11
EFNB3Q15768 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 AL355306.1-201ENST00000415580 579 ntBASIC14.39□□□□□ -0.11
EFNB3Q15768 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.39□□□□□ -0.11
EFNB3Q15768 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
EFNB3Q15768 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.39□□□□□ -0.11
EFNB3Q15768 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.39□□□□□ -0.11
EFNB3Q15768 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.39□□□□□ -0.11
EFNB3Q15768 MPDU1-223ENST00000582151 728 ntBASIC14.39□□□□□ -0.11
EFNB3Q15768 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.39□□□□□ -0.11
EFNB3Q15768 AC004835.2-201ENST00000603762 682 ntBASIC14.39□□□□□ -0.11
EFNB3Q15768 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.39□□□□□ -0.11
EFNB3Q15768 AL161645.1-201ENST00000622716 1255 ntBASIC14.39□□□□□ -0.11
EFNB3Q15768 AC105339.1-204ENST00000636249 355 ntBASIC14.39□□□□□ -0.11
EFNB3Q15768 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
EFNB3Q15768 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.39□□□□□ -0.11
EFNB3Q15768 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
EFNB3Q15768 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
EFNB3Q15768 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
EFNB3Q15768 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNB3Q15768 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.38□□□□□ -0.11
EFNB3Q15768 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.38□□□□□ -0.11
EFNB3Q15768 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.38□□□□□ -0.11
EFNB3Q15768 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.38□□□□□ -0.11
EFNB3Q15768 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.38□□□□□ -0.11
EFNB3Q15768 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 PMS2P2-201ENST00000425039 1128 ntBASIC14.38□□□□□ -0.11
EFNB3Q15768 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.38□□□□□ -0.11
EFNB3Q15768 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.38□□□□□ -0.11
EFNB3Q15768 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.38□□□□□ -0.11
EFNB3Q15768 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.38□□□□□ -0.11
EFNB3Q15768 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.38□□□□□ -0.11
EFNB3Q15768 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.38□□□□□ -0.11
EFNB3Q15768 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
EFNB3Q15768 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.38□□□□□ -0.11
EFNB3Q15768 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.38□□□□□ -0.11
EFNB3Q15768 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.38□□□□□ -0.11
EFNB3Q15768 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EFNB3Q15768 AL009183.1-201ENST00000603760 355 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms