Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SNRPFP62306 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPFP62306 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPFP62306 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SNRPFP62306 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.34■□□□□ 0.53
SNRPFP62306 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPFP62306 AL513480.1-201ENST00000451731 511 ntBASIC18.34■□□□□ 0.53
SNRPFP62306 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.34■□□□□ 0.53
SNRPFP62306 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.34■□□□□ 0.53
SNRPFP62306 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPFP62306 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.34■□□□□ 0.53
SNRPFP62306 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SNRPFP62306 AC023141.13-201ENST00000604991 943 ntBASIC18.34■□□□□ 0.53
SNRPFP62306 AC064836.3-201ENST00000607928 673 ntBASIC18.34■□□□□ 0.53
SNRPFP62306 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.34■□□□□ 0.53
SNRPFP62306 AC120114.3-201ENST00000611923 658 ntBASIC18.34■□□□□ 0.53
SNRPFP62306 FAM197Y3-203ENST00000618346 717 ntBASIC18.34■□□□□ 0.53
SNRPFP62306 AC010507.1-201ENST00000633895 436 ntBASIC18.34■□□□□ 0.53
SNRPFP62306 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPFP62306 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.34■□□□□ 0.53
SNRPFP62306 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPFP62306 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.34■□□□□ 0.53
SNRPFP62306 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPFP62306 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.34■□□□□ 0.53
SNRPFP62306 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPFP62306 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
SNRPFP62306 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.33■□□□□ 0.53
SNRPFP62306 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNRPFP62306 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.33■□□□□ 0.53
SNRPFP62306 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRPFP62306 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SNRPFP62306 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNRPFP62306 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNRPFP62306 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRPFP62306 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.33■□□□□ 0.53
SNRPFP62306 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
SNRPFP62306 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNRPFP62306 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRPFP62306 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.33■□□□□ 0.53
SNRPFP62306 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRPFP62306 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.33■□□□□ 0.52
SNRPFP62306 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPFP62306 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPFP62306 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPFP62306 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPFP62306 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.33■□□□□ 0.52
SNRPFP62306 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.33■□□□□ 0.52
SNRPFP62306 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPFP62306 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.33■□□□□ 0.52
SNRPFP62306 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SNRPFP62306 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.33■□□□□ 0.52
SNRPFP62306 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.33■□□□□ 0.52
SNRPFP62306 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.33■□□□□ 0.52
SNRPFP62306 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.33■□□□□ 0.52
SNRPFP62306 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.33■□□□□ 0.52
SNRPFP62306 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.33■□□□□ 0.52
SNRPFP62306 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.33■□□□□ 0.52
SNRPFP62306 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.33■□□□□ 0.52
SNRPFP62306 AC027601.4-201ENST00000611259 610 ntBASIC18.33■□□□□ 0.52
SNRPFP62306 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.33■□□□□ 0.52
SNRPFP62306 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.33■□□□□ 0.52
SNRPFP62306 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPFP62306 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPFP62306 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPFP62306 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SNRPFP62306 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPFP62306 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPFP62306 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SNRPFP62306 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPFP62306 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.33■□□□□ 0.52
SNRPFP62306 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNRPFP62306 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.32■□□□□ 0.52
SNRPFP62306 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.32■□□□□ 0.52
SNRPFP62306 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SNRPFP62306 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.32■□□□□ 0.52
SNRPFP62306 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SNRPFP62306 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.32■□□□□ 0.52
SNRPFP62306 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
SNRPFP62306 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 HMGA1P7-201ENST00000406908 502 ntBASIC18.32■□□□□ 0.52
SNRPFP62306 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 PMS2P4-201ENST00000412466 1052 ntBASIC18.32■□□□□ 0.52
SNRPFP62306 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SNRPFP62306 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SNRPFP62306 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.32■□□□□ 0.52
SNRPFP62306 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.32■□□□□ 0.52
SNRPFP62306 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.32■□□□□ 0.52
SNRPFP62306 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.32■□□□□ 0.52
SNRPFP62306 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNRPFP62306 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms