Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CKS1BP61024 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS1BP61024 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS1BP61024 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS1BP61024 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS1BP61024 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS1BP61024 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS1BP61024 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC11.94□□□□□ -0.5
CKS1BP61024 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC11.94□□□□□ -0.5
CKS1BP61024 AL353719.1-201ENST00000566847 864 ntBASIC11.94□□□□□ -0.5
CKS1BP61024 REXO1L10P-201ENST00000615707 1290 ntBASIC11.94□□□□□ -0.5
CKS1BP61024 REXO1L12P-201ENST00000622156 912 ntBASIC11.94□□□□□ -0.5
CKS1BP61024 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC11.94□□□□□ -0.5
CKS1BP61024 AC116562.4-202ENST00000641738 218 ntBASIC11.94□□□□□ -0.5
CKS1BP61024 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC11.94□□□□□ -0.5
CKS1BP61024 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
CKS1BP61024 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS1BP61024 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC11.94□□□□□ -0.5
CKS1BP61024 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CKS1BP61024 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC11.94□□□□□ -0.5
CKS1BP61024 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CKS1BP61024 AC005252.3-201ENST00000623855 2258 ntBASIC11.94□□□□□ -0.5
CKS1BP61024 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS1BP61024 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
CKS1BP61024 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS1BP61024 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS1BP61024 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC11.94□□□□□ -0.5
CKS1BP61024 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS1BP61024 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC11.94□□□□□ -0.5
CKS1BP61024 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
CKS1BP61024 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 AC107918.4-201ENST00000641966 3141 ntBASIC11.93□□□□□ -0.5
CKS1BP61024 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC11.93□□□□□ -0.5
CKS1BP61024 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 LINC00602-201ENST00000629776 2065 ntBASIC11.93□□□□□ -0.5
CKS1BP61024 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
CKS1BP61024 AL731571.1-201ENST00000617058 5428 ntBASIC11.93□□□□□ -0.5
CKS1BP61024 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
CKS1BP61024 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.93□□□□□ -0.5
CKS1BP61024 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
CKS1BP61024 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC11.93□□□□□ -0.5
CKS1BP61024 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC11.93□□□□□ -0.5
CKS1BP61024 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC11.93□□□□□ -0.5
CKS1BP61024 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC11.93□□□□□ -0.5
CKS1BP61024 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC11.93□□□□□ -0.5
CKS1BP61024 GRAP-204ENST00000573099 846 ntTSL 3 BASIC11.93□□□□□ -0.5
CKS1BP61024 AP005242.2-201ENST00000580065 1175 ntBASIC11.93□□□□□ -0.5
CKS1BP61024 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CKS1BP61024 AC010240.3-201ENST00000607688 395 ntBASIC11.93□□□□□ -0.5
CKS1BP61024 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.93□□□□□ -0.5
CKS1BP61024 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CKS1BP61024 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
CKS1BP61024 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC11.93□□□□□ -0.5
CKS1BP61024 AC106881.1-201ENST00000605849 3329 ntBASIC11.93□□□□□ -0.5
CKS1BP61024 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
CKS1BP61024 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 OR2I1P-209ENST00000641730 5365 ntBASIC11.93□□□□□ -0.5
CKS1BP61024 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC11.93□□□□□ -0.5
CKS1BP61024 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC11.93□□□□□ -0.5
CKS1BP61024 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC11.93□□□□□ -0.5
CKS1BP61024 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CKS1BP61024 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.93□□□□□ -0.5
CKS1BP61024 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CKS1BP61024 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.93□□□□□ -0.5
CKS1BP61024 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.93□□□□□ -0.5
CKS1BP61024 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CKS1BP61024 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.93□□□□□ -0.5
CKS1BP61024 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms