Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA1P56159 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.11■□□□□ 0.01
GFRA1P56159 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.11■□□□□ 0.01
GFRA1P56159 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.11■□□□□ 0.01
GFRA1P56159 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA1P56159 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.11■□□□□ 0.01
GFRA1P56159 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.11■□□□□ 0.01
GFRA1P56159 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA1P56159 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA1P56159 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.11■□□□□ 0.01
GFRA1P56159 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.11■□□□□ 0.01
GFRA1P56159 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
GFRA1P56159 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.11■□□□□ 0.01
GFRA1P56159 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.11■□□□□ 0.01
GFRA1P56159 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.11■□□□□ 0.01
GFRA1P56159 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.11■□□□□ 0.01
GFRA1P56159 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
GFRA1P56159 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.11■□□□□ 0.01
GFRA1P56159 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA1P56159 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.11■□□□□ 0.01
GFRA1P56159 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.11■□□□□ 0.01
GFRA1P56159 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA1P56159 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA1P56159 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA1P56159 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
GFRA1P56159 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA1P56159 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA1P56159 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA1P56159 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.11■□□□□ 0.01
GFRA1P56159 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.11■□□□□ 0.01
GFRA1P56159 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA1P56159 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GFRA1P56159 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.1■□□□□ 0.01
GFRA1P56159 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.1■□□□□ 0.01
GFRA1P56159 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.1■□□□□ 0.01
GFRA1P56159 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GFRA1P56159 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
GFRA1P56159 AC092183.1-201ENST00000469884 875 ntBASIC15.1■□□□□ 0.01
GFRA1P56159 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.1■□□□□ 0.01
GFRA1P56159 FAM86C2P-203ENST00000528684 1004 ntBASIC15.1■□□□□ 0.01
GFRA1P56159 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.1■□□□□ 0.01
GFRA1P56159 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GFRA1P56159 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.1■□□□□ 0.01
GFRA1P56159 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 AL161645.1-201ENST00000622716 1255 ntBASIC15.1■□□□□ 0.01
GFRA1P56159 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.1■□□□□ 0.01
GFRA1P56159 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GFRA1P56159 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
GFRA1P56159 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFRA1P56159 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
GFRA1P56159 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GFRA1P56159 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.09■□□□□ 0.01
GFRA1P56159 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA1P56159 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.09■□□□□ 0.01
GFRA1P56159 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.09■□□□□ 0.01
GFRA1P56159 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GFRA1P56159 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.09■□□□□ 0.01
GFRA1P56159 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA1P56159 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GFRA1P56159 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GFRA1P56159 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.09■□□□□ 0.01
GFRA1P56159 AL671277.1-201ENST00000429656 993 ntBASIC15.09■□□□□ 0.01
GFRA1P56159 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.09■□□□□ 0.01
GFRA1P56159 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.09■□□□□ 0.01
GFRA1P56159 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA1P56159 AP000344.2-201ENST00000512987 629 ntBASIC15.09■□□□□ 0.01
GFRA1P56159 AP002490.2-201ENST00000524791 560 ntBASIC15.09■□□□□ 0.01
GFRA1P56159 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GFRA1P56159 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.09■□□□□ 0.01
GFRA1P56159 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.09■□□□□ 0.01
GFRA1P56159 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.09■□□□□ 0.01
GFRA1P56159 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.09■□□□□ 0.01
GFRA1P56159 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.09■□□□□ 0.01
GFRA1P56159 AL596442.2-201ENST00000610240 980 ntBASIC15.09■□□□□ 0.01
GFRA1P56159 AL513210.1-201ENST00000629608 234 ntBASIC15.09■□□□□ 0.01
GFRA1P56159 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms