Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB28P51157 AC023274.1-201ENST00000418278 595 ntBASIC16.31■□□□□ 0.2
RAB28P51157 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.31■□□□□ 0.2
RAB28P51157 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB28P51157 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB28P51157 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB28P51157 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.31■□□□□ 0.2
RAB28P51157 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB28P51157 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB28P51157 MIR4492-201ENST00000581627 80 ntBASIC16.31■□□□□ 0.2
RAB28P51157 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB28P51157 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB28P51157 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
RAB28P51157 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAB28P51157 AC013467.2-201ENST00000605472 835 ntBASIC16.31■□□□□ 0.2
RAB28P51157 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB28P51157 AC092865.6-201ENST00000642101 219 ntBASIC16.31■□□□□ 0.2
RAB28P51157 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB28P51157 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
RAB28P51157 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB28P51157 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB28P51157 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB28P51157 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB28P51157 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB28P51157 AC005915.1-201ENST00000624912 2018 ntBASIC16.31■□□□□ 0.2
RAB28P51157 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB28P51157 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB28P51157 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB28P51157 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB28P51157 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB28P51157 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB28P51157 AC006277.1-201ENST00000624348 1610 ntBASIC16.3■□□□□ 0.2
RAB28P51157 AC080080.1-201ENST00000625121 2420 ntBASIC16.3■□□□□ 0.2
RAB28P51157 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB28P51157 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB28P51157 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB28P51157 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB28P51157 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RAB28P51157 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB28P51157 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAB28P51157 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB28P51157 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB28P51157 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB28P51157 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB28P51157 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB28P51157 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB28P51157 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB28P51157 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB28P51157 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB28P51157 AC004832.2-201ENST00000426397 482 ntBASIC16.3■□□□□ 0.2
RAB28P51157 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB28P51157 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.3■□□□□ 0.2
RAB28P51157 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.3■□□□□ 0.2
RAB28P51157 AC023511.2-201ENST00000618803 211 ntBASIC16.3■□□□□ 0.2
RAB28P51157 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB28P51157 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB28P51157 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB28P51157 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
RAB28P51157 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB28P51157 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB28P51157 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
RAB28P51157 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB28P51157 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB28P51157 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB28P51157 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB28P51157 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB28P51157 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB28P51157 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB28P51157 AC074386.1-202ENST00000463561 864 ntBASIC16.29■□□□□ 0.2
RAB28P51157 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RAB28P51157 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB28P51157 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB28P51157 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB28P51157 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.29■□□□□ 0.2
RAB28P51157 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB28P51157 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB28P51157 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB28P51157 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB28P51157 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB28P51157 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms