Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 SNHG9-202ENST00000564014 471 ntBASIC17.86■□□□□ 0.45
LHX1P48742 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.86■□□□□ 0.45
LHX1P48742 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX1P48742 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.86■□□□□ 0.45
LHX1P48742 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.86■□□□□ 0.45
LHX1P48742 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.86■□□□□ 0.45
LHX1P48742 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX1P48742 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LHX1P48742 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX1P48742 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.86■□□□□ 0.45
LHX1P48742 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.86■□□□□ 0.45
LHX1P48742 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX1P48742 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX1P48742 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LHX1P48742 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.86■□□□□ 0.45
LHX1P48742 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LHX1P48742 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LHX1P48742 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LHX1P48742 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LHX1P48742 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LHX1P48742 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX1P48742 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LHX1P48742 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX1P48742 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LHX1P48742 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LHX1P48742 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX1P48742 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX1P48742 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.85■□□□□ 0.45
LHX1P48742 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX1P48742 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX1P48742 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
LHX1P48742 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX1P48742 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
LHX1P48742 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LHX1P48742 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LHX1P48742 AL355306.1-201ENST00000415580 579 ntBASIC17.85■□□□□ 0.45
LHX1P48742 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.85■□□□□ 0.45
LHX1P48742 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX1P48742 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.85■□□□□ 0.45
LHX1P48742 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.85■□□□□ 0.45
LHX1P48742 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LHX1P48742 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LHX1P48742 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.85■□□□□ 0.45
LHX1P48742 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.85■□□□□ 0.45
LHX1P48742 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LHX1P48742 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.85■□□□□ 0.45
LHX1P48742 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.85■□□□□ 0.45
LHX1P48742 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.85■□□□□ 0.45
LHX1P48742 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.85■□□□□ 0.45
LHX1P48742 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.85■□□□□ 0.45
LHX1P48742 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LHX1P48742 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LHX1P48742 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.85■□□□□ 0.45
LHX1P48742 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.85■□□□□ 0.45
LHX1P48742 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.85■□□□□ 0.45
LHX1P48742 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LHX1P48742 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.85■□□□□ 0.45
LHX1P48742 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.85■□□□□ 0.45
LHX1P48742 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.84■□□□□ 0.45
LHX1P48742 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LHX1P48742 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX1P48742 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LHX1P48742 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.84■□□□□ 0.45
LHX1P48742 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.84■□□□□ 0.45
LHX1P48742 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LHX1P48742 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 AKAP8P1-201ENST00000434743 1349 ntBASIC17.84■□□□□ 0.45
LHX1P48742 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.84■□□□□ 0.45
LHX1P48742 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.84■□□□□ 0.45
LHX1P48742 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.84■□□□□ 0.45
LHX1P48742 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.84■□□□□ 0.45
LHX1P48742 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX1P48742 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX1P48742 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX1P48742 AP000344.2-201ENST00000512987 629 ntBASIC17.84■□□□□ 0.45
LHX1P48742 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 RARRES2P8-201ENST00000566335 367 ntBASIC17.84■□□□□ 0.45
LHX1P48742 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.84■□□□□ 0.45
LHX1P48742 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX1P48742 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX1P48742 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX1P48742 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LHX1P48742 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX1P48742 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
LHX1P48742 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LHX1P48742 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LHX1P48742 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.83■□□□□ 0.45
LHX1P48742 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms