Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CSNK1DP48730 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CSNK1DP48730 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.89■□□□□ 0.29
CSNK1DP48730 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CSNK1DP48730 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CSNK1DP48730 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 ALG1L5P-201ENST00000482043 771 ntBASIC16.89■□□□□ 0.29
CSNK1DP48730 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.89■□□□□ 0.29
CSNK1DP48730 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.89■□□□□ 0.29
CSNK1DP48730 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.89■□□□□ 0.29
CSNK1DP48730 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CSNK1DP48730 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.89■□□□□ 0.29
CSNK1DP48730 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 ELL2P1-201ENST00000413990 1906 ntBASIC16.89■□□□□ 0.29
CSNK1DP48730 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CSNK1DP48730 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.89■□□□□ 0.29
CSNK1DP48730 AC006538.1-201ENST00000567905 1585 ntBASIC16.89■□□□□ 0.29
CSNK1DP48730 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CSNK1DP48730 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1DP48730 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CSNK1DP48730 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.88■□□□□ 0.29
CSNK1DP48730 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.88■□□□□ 0.29
CSNK1DP48730 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.88■□□□□ 0.29
CSNK1DP48730 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CSNK1DP48730 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.88■□□□□ 0.29
CSNK1DP48730 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.88■□□□□ 0.29
CSNK1DP48730 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.88■□□□□ 0.29
CSNK1DP48730 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.88■□□□□ 0.29
CSNK1DP48730 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.88■□□□□ 0.29
CSNK1DP48730 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CSNK1DP48730 FAM86C2P-203ENST00000528684 1004 ntBASIC16.88■□□□□ 0.29
CSNK1DP48730 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.88■□□□□ 0.29
CSNK1DP48730 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CSNK1DP48730 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.88■□□□□ 0.29
CSNK1DP48730 AC099522.2-201ENST00000607001 744 ntBASIC16.88■□□□□ 0.29
CSNK1DP48730 AL078644.1-201ENST00000609881 752 ntBASIC16.88■□□□□ 0.29
CSNK1DP48730 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.88■□□□□ 0.29
CSNK1DP48730 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.88■□□□□ 0.29
CSNK1DP48730 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CSNK1DP48730 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CSNK1DP48730 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1DP48730 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1DP48730 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1DP48730 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1DP48730 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.87■□□□□ 0.29
CSNK1DP48730 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1DP48730 AL671710.1-201ENST00000610245 2349 ntBASIC16.87■□□□□ 0.29
CSNK1DP48730 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1DP48730 AC138932.1-201ENST00000534164 6830 ntBASIC16.87■□□□□ 0.29
CSNK1DP48730 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1DP48730 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CSNK1DP48730 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CSNK1DP48730 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1DP48730 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1DP48730 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.87■□□□□ 0.29
CSNK1DP48730 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1DP48730 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1DP48730 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1DP48730 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CSNK1DP48730 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1DP48730 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1DP48730 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.87■□□□□ 0.29
CSNK1DP48730 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1DP48730 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.87■□□□□ 0.29
CSNK1DP48730 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1DP48730 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.87■□□□□ 0.29
CSNK1DP48730 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms