Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 KRT8P49-201ENST00000604166 1432 ntBASIC21.25■□□□□ 0.99
COL15A1P39059 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
COL15A1P39059 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL15A1P39059 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
COL15A1P39059 PIN1P1-201ENST00000412108 996 ntBASIC21.24■□□□□ 0.99
COL15A1P39059 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.24■□□□□ 0.99
COL15A1P39059 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL15A1P39059 MIR4492-201ENST00000581627 80 ntBASIC21.24■□□□□ 0.99
COL15A1P39059 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL15A1P39059 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
COL15A1P39059 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL15A1P39059 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
COL15A1P39059 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL15A1P39059 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.24■□□□□ 0.99
COL15A1P39059 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
COL15A1P39059 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.24■□□□□ 0.99
COL15A1P39059 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
COL15A1P39059 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
COL15A1P39059 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
COL15A1P39059 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL15A1P39059 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL15A1P39059 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.24■□□□□ 0.99
COL15A1P39059 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
COL15A1P39059 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL15A1P39059 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL15A1P39059 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL15A1P39059 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.24■□□□□ 0.99
COL15A1P39059 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL15A1P39059 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL15A1P39059 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.24■□□□□ 0.99
COL15A1P39059 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL15A1P39059 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL15A1P39059 HNRNPA3P1-201ENST00000401429 1139 ntBASIC21.23■□□□□ 0.99
COL15A1P39059 COX5BP8-201ENST00000416911 349 ntBASIC21.23■□□□□ 0.99
COL15A1P39059 HNRNPA3P5-201ENST00000455201 833 ntBASIC21.23■□□□□ 0.99
COL15A1P39059 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.23■□□□□ 0.99
COL15A1P39059 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
COL15A1P39059 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.23■□□□□ 0.99
COL15A1P39059 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.23■□□□□ 0.99
COL15A1P39059 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC21.23■□□□□ 0.99
COL15A1P39059 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
COL15A1P39059 AL358472.5-202ENST00000641448 1267 ntBASIC21.23■□□□□ 0.99
COL15A1P39059 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
COL15A1P39059 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL15A1P39059 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
COL15A1P39059 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL15A1P39059 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL15A1P39059 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.23■□□□□ 0.99
COL15A1P39059 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC21.23■□□□□ 0.99
COL15A1P39059 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL15A1P39059 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.23■□□□□ 0.99
COL15A1P39059 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.23■□□□□ 0.99
COL15A1P39059 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL15A1P39059 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL15A1P39059 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC21.23■□□□□ 0.99
COL15A1P39059 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL15A1P39059 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.23■□□□□ 0.99
COL15A1P39059 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL15A1P39059 RN7SL692P-201ENST00000464677 288 ntBASIC21.23■□□□□ 0.99
COL15A1P39059 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL15A1P39059 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC21.23■□□□□ 0.99
COL15A1P39059 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.23■□□□□ 0.99
COL15A1P39059 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
COL15A1P39059 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL15A1P39059 AC003101.2-201ENST00000612557 442 ntBASIC21.23■□□□□ 0.99
COL15A1P39059 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.22■□□□□ 0.99
COL15A1P39059 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.22■□□□□ 0.99
COL15A1P39059 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL15A1P39059 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
COL15A1P39059 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.22■□□□□ 0.99
COL15A1P39059 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.22■□□□□ 0.99
COL15A1P39059 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL15A1P39059 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL15A1P39059 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.22■□□□□ 0.99
COL15A1P39059 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
COL15A1P39059 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL15A1P39059 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.22■□□□□ 0.99
COL15A1P39059 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COL15A1P39059 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL15A1P39059 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.22■□□□□ 0.99
COL15A1P39059 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.22■□□□□ 0.99
COL15A1P39059 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL15A1P39059 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL15A1P39059 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.22■□□□□ 0.99
COL15A1P39059 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL15A1P39059 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL15A1P39059 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC21.22■□□□□ 0.99
COL15A1P39059 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL15A1P39059 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL15A1P39059 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.22■□□□□ 0.99
COL15A1P39059 SPTLC1P1-201ENST00000447199 261 ntBASIC21.22■□□□□ 0.99
COL15A1P39059 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.22■□□□□ 0.99
COL15A1P39059 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.22■□□□□ 0.99
COL15A1P39059 AL596325.1-201ENST00000563991 1082 ntBASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms