Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCN1P35523 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLCN1P35523 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCN1P35523 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.29■□□□□ 0.68
CLCN1P35523 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCN1P35523 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCN1P35523 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLCN1P35523 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CLCN1P35523 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLCN1P35523 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CLCN1P35523 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCN1P35523 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.28■□□□□ 0.68
CLCN1P35523 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLCN1P35523 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CLCN1P35523 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 AP002414.2-201ENST00000591780 3365 ntBASIC19.28■□□□□ 0.68
CLCN1P35523 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
CLCN1P35523 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.28■□□□□ 0.68
CLCN1P35523 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLCN1P35523 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.28■□□□□ 0.68
CLCN1P35523 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CLCN1P35523 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 AL359075.1-203ENST00000462729 1002 ntBASIC19.28■□□□□ 0.68
CLCN1P35523 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLCN1P35523 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.28■□□□□ 0.68
CLCN1P35523 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.28■□□□□ 0.68
CLCN1P35523 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.28■□□□□ 0.68
CLCN1P35523 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.28■□□□□ 0.68
CLCN1P35523 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.28■□□□□ 0.68
CLCN1P35523 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CLCN1P35523 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCN1P35523 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLCN1P35523 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CLCN1P35523 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN1P35523 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.27■□□□□ 0.68
CLCN1P35523 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN1P35523 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN1P35523 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC19.27■□□□□ 0.68
CLCN1P35523 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN1P35523 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN1P35523 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN1P35523 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.27■□□□□ 0.68
CLCN1P35523 HBZP1-201ENST00000354915 429 ntBASIC19.27■□□□□ 0.68
CLCN1P35523 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN1P35523 HOMER2P1-201ENST00000455653 964 ntBASIC19.27■□□□□ 0.68
CLCN1P35523 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN1P35523 RN7SL850P-201ENST00000579959 291 ntBASIC19.27■□□□□ 0.68
CLCN1P35523 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CLCN1P35523 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
CLCN1P35523 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.27■□□□□ 0.68
CLCN1P35523 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCN1P35523 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.27■□□□□ 0.68
CLCN1P35523 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CLCN1P35523 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLCN1P35523 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLCN1P35523 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLCN1P35523 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CLCN1P35523 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CLCN1P35523 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCN1P35523 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLCN1P35523 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCN1P35523 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms