Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CKS2P33552 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
CKS2P33552 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CKS2P33552 AC104771.1-201ENST00000603335 964 ntBASIC12.5□□□□□ -0.41
CKS2P33552 AC009154.2-201ENST00000621177 724 ntBASIC12.5□□□□□ -0.41
CKS2P33552 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CKS2P33552 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.5□□□□□ -0.41
CKS2P33552 MTHFR-217ENST00000641820 1569 ntBASIC12.5□□□□□ -0.41
CKS2P33552 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CKS2P33552 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.5□□□□□ -0.41
CKS2P33552 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CKS2P33552 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.5□□□□□ -0.41
CKS2P33552 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CKS2P33552 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS2P33552 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS2P33552 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.5□□□□□ -0.41
CKS2P33552 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS2P33552 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.5□□□□□ -0.41
CKS2P33552 AC092384.3-202ENST00000564646 2873 ntBASIC12.5□□□□□ -0.41
CKS2P33552 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS2P33552 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS2P33552 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS2P33552 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CKS2P33552 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.49□□□□□ -0.41
CKS2P33552 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.49□□□□□ -0.41
CKS2P33552 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.49□□□□□ -0.41
CKS2P33552 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 EGFEM1P-202ENST00000431685 1563 ntBASIC12.49□□□□□ -0.41
CKS2P33552 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.49□□□□□ -0.41
CKS2P33552 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.49□□□□□ -0.41
CKS2P33552 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
CKS2P33552 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CKS2P33552 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 KLF13-207ENST00000560473 489 ntTSL 3 BASIC12.49□□□□□ -0.41
CKS2P33552 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CKS2P33552 AP005242.2-201ENST00000580065 1175 ntBASIC12.49□□□□□ -0.41
CKS2P33552 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
CKS2P33552 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CKS2P33552 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS2P33552 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.49□□□□□ -0.41
CKS2P33552 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.49□□□□□ -0.41
CKS2P33552 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS2P33552 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
CKS2P33552 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.48□□□□□ -0.41
CKS2P33552 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.48□□□□□ -0.41
CKS2P33552 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.48□□□□□ -0.41
CKS2P33552 AC144831.1-201ENST00000573312 2656 ntBASIC12.48□□□□□ -0.41
CKS2P33552 AL136379.1-201ENST00000623471 2642 ntBASIC12.48□□□□□ -0.41
CKS2P33552 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.48□□□□□ -0.41
CKS2P33552 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CKS2P33552 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.48□□□□□ -0.41
CKS2P33552 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CKS2P33552 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms