Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40P25942 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.56□□□□□ -0.08
CD40P25942 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.56□□□□□ -0.08
CD40P25942 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.56□□□□□ -0.08
CD40P25942 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CD40P25942 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.56□□□□□ -0.08
CD40P25942 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CD40P25942 AC099522.2-201ENST00000607001 744 ntBASIC14.56□□□□□ -0.08
CD40P25942 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CD40P25942 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 KRT18P28-201ENST00000453838 1332 ntBASIC14.56□□□□□ -0.08
CD40P25942 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40P25942 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CD40P25942 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
CD40P25942 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CD40P25942 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD40P25942 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.56□□□□□ -0.08
CD40P25942 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CD40P25942 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD40P25942 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CD40P25942 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD40P25942 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD40P25942 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.55□□□□□ -0.08
CD40P25942 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.55□□□□□ -0.08
CD40P25942 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CD40P25942 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.55□□□□□ -0.08
CD40P25942 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD40P25942 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.55□□□□□ -0.08
CD40P25942 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CD40P25942 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.55□□□□□ -0.08
CD40P25942 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD40P25942 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.55□□□□□ -0.08
CD40P25942 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD40P25942 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD40P25942 AL355306.1-201ENST00000415580 579 ntBASIC14.55□□□□□ -0.08
CD40P25942 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD40P25942 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.55□□□□□ -0.08
CD40P25942 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD40P25942 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.55□□□□□ -0.08
CD40P25942 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.55□□□□□ -0.08
CD40P25942 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
CD40P25942 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.55□□□□□ -0.08
CD40P25942 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.55□□□□□ -0.08
CD40P25942 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.55□□□□□ -0.08
CD40P25942 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD40P25942 AL009183.1-201ENST00000603760 355 ntBASIC14.55□□□□□ -0.08
CD40P25942 AC004835.2-201ENST00000603762 682 ntBASIC14.55□□□□□ -0.08
CD40P25942 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.55□□□□□ -0.08
CD40P25942 AL161645.1-201ENST00000622716 1255 ntBASIC14.55□□□□□ -0.08
CD40P25942 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
CD40P25942 TUBB8P12-201ENST00000308911 1335 ntBASIC14.55□□□□□ -0.08
CD40P25942 TUBB7P-202ENST00000428444 1305 ntBASIC14.55□□□□□ -0.08
CD40P25942 TUBB8P7-204ENST00000567960 1332 ntBASIC14.55□□□□□ -0.08
CD40P25942 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD40P25942 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD40P25942 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CD40P25942 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CD40P25942 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.55□□□□□ -0.08
CD40P25942 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.55□□□□□ -0.08
CD40P25942 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD40P25942 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CD40P25942 AC092053.1-201ENST00000605787 1936 ntBASIC14.54□□□□□ -0.08
CD40P25942 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CD40P25942 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.54□□□□□ -0.08
CD40P25942 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CD40P25942 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CD40P25942 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CD40P25942 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CD40P25942 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CD40P25942 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 ADH5P3-201ENST00000433842 1137 ntBASIC14.54□□□□□ -0.08
CD40P25942 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 TIMM8BP1-201ENST00000452384 211 ntBASIC14.54□□□□□ -0.08
CD40P25942 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40P25942 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CD40P25942 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.54□□□□□ -0.08
CD40P25942 AC109635.5-201ENST00000533593 962 ntBASIC14.54□□□□□ -0.08
CD40P25942 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms