Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.07■□□□□ 0.32
XPAP23025 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.07■□□□□ 0.32
XPAP23025 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
XPAP23025 PP12613-201ENST00000424958 2230 ntBASIC17.06■□□□□ 0.32
XPAP23025 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
XPAP23025 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
XPAP23025 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.06■□□□□ 0.32
XPAP23025 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 AC025580.3-201ENST00000617932 1424 ntBASIC17.06■□□□□ 0.32
XPAP23025 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.06■□□□□ 0.32
XPAP23025 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.06■□□□□ 0.32
XPAP23025 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.06■□□□□ 0.32
XPAP23025 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 YBX2P1-201ENST00000394192 760 ntBASIC17.06■□□□□ 0.32
XPAP23025 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.06■□□□□ 0.32
XPAP23025 RHOQP3-201ENST00000437982 621 ntBASIC17.06■□□□□ 0.32
XPAP23025 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.06■□□□□ 0.32
XPAP23025 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.06■□□□□ 0.32
XPAP23025 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.06■□□□□ 0.32
XPAP23025 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.06■□□□□ 0.32
XPAP23025 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
XPAP23025 AC010327.4-202ENST00000591484 748 ntBASIC17.06■□□□□ 0.32
XPAP23025 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.06■□□□□ 0.32
XPAP23025 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.06■□□□□ 0.32
XPAP23025 AC092865.6-201ENST00000642101 219 ntBASIC17.06■□□□□ 0.32
XPAP23025 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
XPAP23025 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.06■□□□□ 0.32
XPAP23025 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.06■□□□□ 0.32
XPAP23025 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.06■□□□□ 0.32
XPAP23025 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XPAP23025 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.05■□□□□ 0.32
XPAP23025 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
XPAP23025 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
XPAP23025 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
XPAP23025 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
XPAP23025 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.05■□□□□ 0.32
XPAP23025 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
XPAP23025 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
XPAP23025 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
XPAP23025 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.05■□□□□ 0.32
XPAP23025 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
XPAP23025 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.05■□□□□ 0.32
XPAP23025 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.05■□□□□ 0.32
XPAP23025 KRT19P2-202ENST00000557173 1012 ntBASIC17.05■□□□□ 0.32
XPAP23025 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.05■□□□□ 0.32
XPAP23025 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.05■□□□□ 0.32
XPAP23025 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.05■□□□□ 0.32
XPAP23025 AL513190.1-201ENST00000621254 727 ntBASIC17.05■□□□□ 0.32
XPAP23025 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
XPAP23025 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
XPAP23025 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
XPAP23025 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.05■□□□□ 0.32
XPAP23025 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
XPAP23025 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
XPAP23025 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
XPAP23025 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.05■□□□□ 0.32
XPAP23025 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
XPAP23025 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.04■□□□□ 0.32
XPAP23025 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
XPAP23025 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.04■□□□□ 0.32
XPAP23025 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
XPAP23025 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
XPAP23025 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.04■□□□□ 0.32
XPAP23025 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
XPAP23025 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
XPAP23025 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
XPAP23025 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
XPAP23025 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.04■□□□□ 0.32
XPAP23025 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.04■□□□□ 0.32
XPAP23025 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.04■□□□□ 0.32
XPAP23025 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.04■□□□□ 0.32
XPAP23025 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.04■□□□□ 0.32
XPAP23025 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.04■□□□□ 0.32
XPAP23025 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms