Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5AP20339 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RAB5AP20339 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.17□□□□□ -0.3
RAB5AP20339 AC026396.1-201ENST00000419388 421 ntBASIC13.17□□□□□ -0.3
RAB5AP20339 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
RAB5AP20339 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.17□□□□□ -0.3
RAB5AP20339 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.17□□□□□ -0.3
RAB5AP20339 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
RAB5AP20339 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
RAB5AP20339 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5AP20339 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB5AP20339 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RAB5AP20339 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RAB5AP20339 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 AC041040.2-201ENST00000622926 2899 ntBASIC13.17□□□□□ -0.3
RAB5AP20339 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5AP20339 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RAB5AP20339 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5AP20339 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB5AP20339 CICP20-201ENST00000443330 2801 ntBASIC13.17□□□□□ -0.3
RAB5AP20339 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
RAB5AP20339 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
RAB5AP20339 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5AP20339 PTENP1-202ENST00000532280 3996 ntBASIC13.16□□□□□ -0.3
RAB5AP20339 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
RAB5AP20339 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB5AP20339 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
RAB5AP20339 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 AC132938.6-201ENST00000623828 1655 ntBASIC13.16□□□□□ -0.3
RAB5AP20339 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB5AP20339 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAB5AP20339 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 MIR564-202ENST00000385049 94 ntBASIC13.16□□□□□ -0.3
RAB5AP20339 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAB5AP20339 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5AP20339 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
RAB5AP20339 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB5AP20339 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
RAB5AP20339 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.16□□□□□ -0.3
RAB5AP20339 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB5AP20339 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5AP20339 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5AP20339 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5AP20339 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAB5AP20339 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAB5AP20339 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAB5AP20339 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5AP20339 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RAB5AP20339 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RAB5AP20339 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAB5AP20339 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5AP20339 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5AP20339 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5AP20339 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5AP20339 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB5AP20339 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5AP20339 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5AP20339 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RAB5AP20339 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5AP20339 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5AP20339 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RAB5AP20339 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5AP20339 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RAB5AP20339 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
RAB5AP20339 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB5AP20339 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RAB5AP20339 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5AP20339 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5AP20339 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5AP20339 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5AP20339 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.15□□□□□ -0.3
RAB5AP20339 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
RAB5AP20339 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms