Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFRAP16234 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.77■□□□□ 0.44
PDGFRAP16234 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFRAP16234 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.77■□□□□ 0.44
PDGFRAP16234 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PDGFRAP16234 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDGFRAP16234 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PDGFRAP16234 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDGFRAP16234 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PDGFRAP16234 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDGFRAP16234 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.77■□□□□ 0.43
PDGFRAP16234 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDGFRAP16234 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDGFRAP16234 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.77■□□□□ 0.43
PDGFRAP16234 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
PDGFRAP16234 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFRAP16234 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PDGFRAP16234 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFRAP16234 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFRAP16234 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFRAP16234 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFRAP16234 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.76■□□□□ 0.43
PDGFRAP16234 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFRAP16234 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFRAP16234 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.76■□□□□ 0.43
PDGFRAP16234 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.76■□□□□ 0.43
PDGFRAP16234 SLC25A6P2-201ENST00000497974 877 ntBASIC17.76■□□□□ 0.43
PDGFRAP16234 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.76■□□□□ 0.43
PDGFRAP16234 RNA5SP415-201ENST00000517246 115 ntBASIC17.76■□□□□ 0.43
PDGFRAP16234 IGHV3-65-201ENST00000523210 341 ntBASIC17.76■□□□□ 0.43
PDGFRAP16234 AP002490.2-201ENST00000524791 560 ntBASIC17.76■□□□□ 0.43
PDGFRAP16234 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.76■□□□□ 0.43
PDGFRAP16234 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.76■□□□□ 0.43
PDGFRAP16234 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PDGFRAP16234 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDGFRAP16234 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
PDGFRAP16234 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFRAP16234 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.76■□□□□ 0.43
PDGFRAP16234 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PDGFRAP16234 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PDGFRAP16234 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFRAP16234 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFRAP16234 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFRAP16234 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
PDGFRAP16234 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDGFRAP16234 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.76■□□□□ 0.43
PDGFRAP16234 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
PDGFRAP16234 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFRAP16234 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFRAP16234 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.75■□□□□ 0.43
PDGFRAP16234 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.75■□□□□ 0.43
PDGFRAP16234 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFRAP16234 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PDGFRAP16234 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFRAP16234 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFRAP16234 AC104109.2-201ENST00000602919 1418 ntBASIC17.75■□□□□ 0.43
PDGFRAP16234 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFRAP16234 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.75■□□□□ 0.43
PDGFRAP16234 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFRAP16234 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.75■□□□□ 0.43
PDGFRAP16234 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.75■□□□□ 0.43
PDGFRAP16234 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.75■□□□□ 0.43
PDGFRAP16234 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PDGFRAP16234 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PDGFRAP16234 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFRAP16234 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.75■□□□□ 0.43
PDGFRAP16234 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PDGFRAP16234 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFRAP16234 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.75■□□□□ 0.43
PDGFRAP16234 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFRAP16234 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFRAP16234 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFRAP16234 TOP3BP1-201ENST00000420768 1380 ntBASIC17.75■□□□□ 0.43
PDGFRAP16234 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.75■□□□□ 0.43
PDGFRAP16234 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFRAP16234 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFRAP16234 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFRAP16234 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PDGFRAP16234 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
PDGFRAP16234 AC084018.2-201ENST00000613093 2607 ntBASIC17.74■□□□□ 0.43
PDGFRAP16234 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
PDGFRAP16234 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PDGFRAP16234 UNC93B6-202ENST00000528242 690 ntBASIC17.74■□□□□ 0.43
PDGFRAP16234 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.74■□□□□ 0.43
PDGFRAP16234 AC106730.1-201ENST00000566722 1090 ntBASIC17.74■□□□□ 0.43
PDGFRAP16234 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDGFRAP16234 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDGFRAP16234 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDGFRAP16234 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PDGFRAP16234 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.74■□□□□ 0.43
PDGFRAP16234 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms