Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.85■□□□□ 0.45
KRT3P12035 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.85■□□□□ 0.45
KRT3P12035 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT3P12035 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KRT3P12035 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.85■□□□□ 0.45
KRT3P12035 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT3P12035 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.85■□□□□ 0.45
KRT3P12035 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
KRT3P12035 AL031008.1-201ENST00000619963 541 ntBASIC17.85■□□□□ 0.45
KRT3P12035 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.85■□□□□ 0.45
KRT3P12035 AC008735.5-201ENST00000623544 497 ntBASIC17.85■□□□□ 0.45
KRT3P12035 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.85■□□□□ 0.45
KRT3P12035 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
KRT3P12035 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KRT3P12035 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
KRT3P12035 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT3P12035 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT3P12035 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT3P12035 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT3P12035 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KRT3P12035 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KRT3P12035 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
KRT3P12035 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT3P12035 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT3P12035 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
KRT3P12035 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
KRT3P12035 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT3P12035 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
KRT3P12035 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.84■□□□□ 0.45
KRT3P12035 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT3P12035 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT3P12035 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT3P12035 RPS15P9-201ENST00000494093 319 ntBASIC17.84■□□□□ 0.45
KRT3P12035 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.84■□□□□ 0.45
KRT3P12035 AC136632.2-201ENST00000512891 861 ntBASIC17.84■□□□□ 0.45
KRT3P12035 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT3P12035 AC148477.8-201ENST00000624298 468 ntBASIC17.84■□□□□ 0.45
KRT3P12035 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
KRT3P12035 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT3P12035 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT3P12035 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KRT3P12035 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KRT3P12035 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.83■□□□□ 0.45
KRT3P12035 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT3P12035 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.83■□□□□ 0.45
KRT3P12035 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT3P12035 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
KRT3P12035 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT3P12035 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.83■□□□□ 0.45
KRT3P12035 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KRT3P12035 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT3P12035 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT3P12035 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KRT3P12035 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT3P12035 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT3P12035 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
KRT3P12035 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT3P12035 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT3P12035 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.83■□□□□ 0.44
KRT3P12035 AC087163.2-201ENST00000457299 853 ntBASIC17.83■□□□□ 0.44
KRT3P12035 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT3P12035 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT3P12035 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT3P12035 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.83■□□□□ 0.44
KRT3P12035 AC105339.3-201ENST00000560043 636 ntBASIC17.83■□□□□ 0.44
KRT3P12035 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT3P12035 AC104692.2-201ENST00000603054 253 ntBASIC17.83■□□□□ 0.44
KRT3P12035 MIR1199-201ENST00000621445 119 ntBASIC17.83■□□□□ 0.44
KRT3P12035 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT3P12035 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT3P12035 AL391256.1-201ENST00000443260 1855 ntBASIC17.83■□□□□ 0.44
KRT3P12035 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT3P12035 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT3P12035 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT3P12035 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KRT3P12035 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
KRT3P12035 PCDHA14-201ENST00000506751 2298 ntBASIC17.83■□□□□ 0.44
KRT3P12035 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT3P12035 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT3P12035 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT3P12035 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT3P12035 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT3P12035 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms