Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.23□□□□□ -0.29
CD28P10747 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.23□□□□□ -0.29
CD28P10747 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.23□□□□□ -0.29
CD28P10747 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CD28P10747 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
CD28P10747 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CD28P10747 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.23□□□□□ -0.29
CD28P10747 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.23□□□□□ -0.29
CD28P10747 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.23□□□□□ -0.29
CD28P10747 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.23□□□□□ -0.29
CD28P10747 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.23□□□□□ -0.29
CD28P10747 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CD28P10747 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.23□□□□□ -0.29
CD28P10747 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.23□□□□□ -0.29
CD28P10747 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.23□□□□□ -0.29
CD28P10747 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
CD28P10747 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.23□□□□□ -0.29
CD28P10747 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.23□□□□□ -0.29
CD28P10747 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.23□□□□□ -0.29
CD28P10747 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 AL645728.2-201ENST00000641974 660 ntBASIC13.23□□□□□ -0.29
CD28P10747 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 AC133963.1-201ENST00000504166 1679 ntBASIC13.23□□□□□ -0.29
CD28P10747 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.23□□□□□ -0.29
CD28P10747 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CD28P10747 AL121761.2-201ENST00000598007 1648 ntBASIC13.23□□□□□ -0.29
CD28P10747 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CD28P10747 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD28P10747 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CD28P10747 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.22□□□□□ -0.29
CD28P10747 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.22□□□□□ -0.29
CD28P10747 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.22□□□□□ -0.29
CD28P10747 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.22□□□□□ -0.29
CD28P10747 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CD28P10747 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CD28P10747 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.22□□□□□ -0.29
CD28P10747 AL671277.1-201ENST00000429656 993 ntBASIC13.22□□□□□ -0.29
CD28P10747 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 AC140658.5-201ENST00000438532 169 ntBASIC13.22□□□□□ -0.29
CD28P10747 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.22□□□□□ -0.29
CD28P10747 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.22□□□□□ -0.29
CD28P10747 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.22□□□□□ -0.29
CD28P10747 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.22□□□□□ -0.29
CD28P10747 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.22□□□□□ -0.29
CD28P10747 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.22□□□□□ -0.29
CD28P10747 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.22□□□□□ -0.29
CD28P10747 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.22□□□□□ -0.29
CD28P10747 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.22□□□□□ -0.29
CD28P10747 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.22□□□□□ -0.29
CD28P10747 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.22□□□□□ -0.29
CD28P10747 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.22□□□□□ -0.29
CD28P10747 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CD28P10747 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.22□□□□□ -0.29
CD28P10747 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.22□□□□□ -0.29
CD28P10747 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD28P10747 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.21□□□□□ -0.29
CD28P10747 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CD28P10747 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CD28P10747 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.21□□□□□ -0.29
CD28P10747 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms