Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RETP07949 AL023806.1-201ENST00000603994 1649 ntBASIC17.07■□□□□ 0.32
RETP07949 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RETP07949 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RETP07949 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
RETP07949 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RETP07949 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.06■□□□□ 0.32
RETP07949 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RETP07949 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.06■□□□□ 0.32
RETP07949 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.06■□□□□ 0.32
RETP07949 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
RETP07949 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RETP07949 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RETP07949 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.06■□□□□ 0.32
RETP07949 AC140658.5-201ENST00000438532 169 ntBASIC17.06■□□□□ 0.32
RETP07949 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.06■□□□□ 0.32
RETP07949 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.06■□□□□ 0.32
RETP07949 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 AL158211.3-201ENST00000607385 239 ntBASIC17.06■□□□□ 0.32
RETP07949 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RETP07949 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RETP07949 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
RETP07949 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.06■□□□□ 0.32
RETP07949 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RETP07949 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.05■□□□□ 0.32
RETP07949 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.05■□□□□ 0.32
RETP07949 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.05■□□□□ 0.32
RETP07949 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.05■□□□□ 0.32
RETP07949 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
RETP07949 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 SPDYE7P-202ENST00000420373 878 ntBASIC17.05■□□□□ 0.32
RETP07949 NME2P1-201ENST00000426182 414 ntBASIC17.05■□□□□ 0.32
RETP07949 GPS2P2-201ENST00000430745 888 ntBASIC17.05■□□□□ 0.32
RETP07949 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.05■□□□□ 0.32
RETP07949 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RETP07949 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.05■□□□□ 0.32
RETP07949 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.05■□□□□ 0.32
RETP07949 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.05■□□□□ 0.32
RETP07949 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.05■□□□□ 0.32
RETP07949 AC243562.1-201ENST00000560672 389 ntBASIC17.05■□□□□ 0.32
RETP07949 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RETP07949 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.05■□□□□ 0.32
RETP07949 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RETP07949 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.04■□□□□ 0.32
RETP07949 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.04■□□□□ 0.32
RETP07949 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RETP07949 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RETP07949 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 AKAP8P1-201ENST00000434743 1349 ntBASIC17.04■□□□□ 0.32
RETP07949 AL590787.1-201ENST00000568856 1315 ntBASIC17.04■□□□□ 0.32
RETP07949 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.04■□□□□ 0.32
RETP07949 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 ACTG1P4-201ENST00000425123 1122 ntBASIC17.04■□□□□ 0.32
RETP07949 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.04■□□□□ 0.32
RETP07949 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.04■□□□□ 0.32
RETP07949 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.04■□□□□ 0.32
RETP07949 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.04■□□□□ 0.32
RETP07949 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.04■□□□□ 0.32
RETP07949 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RETP07949 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.04■□□□□ 0.32
RETP07949 AC025048.6-201ENST00000634326 1161 ntBASIC17.04■□□□□ 0.32
RETP07949 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.04■□□□□ 0.32
RETP07949 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms