Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.87■□□□□ 0.13
PDGFAP04085 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.87■□□□□ 0.13
PDGFAP04085 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.87■□□□□ 0.13
PDGFAP04085 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.87■□□□□ 0.13
PDGFAP04085 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.87■□□□□ 0.13
PDGFAP04085 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.87■□□□□ 0.13
PDGFAP04085 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PDGFAP04085 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.87■□□□□ 0.13
PDGFAP04085 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.87■□□□□ 0.13
PDGFAP04085 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.86■□□□□ 0.13
PDGFAP04085 AC093677.2-201ENST00000600169 1863 ntBASIC15.86■□□□□ 0.13
PDGFAP04085 PKD1P1-201ENST00000458669 6805 ntBASIC15.86■□□□□ 0.13
PDGFAP04085 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PDGFAP04085 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.86■□□□□ 0.13
PDGFAP04085 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.86■□□□□ 0.13
PDGFAP04085 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.86■□□□□ 0.13
PDGFAP04085 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.86■□□□□ 0.13
PDGFAP04085 AC023141.5-201ENST00000458585 616 ntBASIC15.86■□□□□ 0.13
PDGFAP04085 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.86■□□□□ 0.13
PDGFAP04085 AC239800.4-201ENST00000603712 296 ntBASIC15.86■□□□□ 0.13
PDGFAP04085 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.86■□□□□ 0.13
PDGFAP04085 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 LINC00628-201ENST00000628516 1289 ntBASIC15.86■□□□□ 0.13
PDGFAP04085 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 AL590787.1-201ENST00000568856 1315 ntBASIC15.86■□□□□ 0.13
PDGFAP04085 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PDGFAP04085 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
PDGFAP04085 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 AL121761.2-201ENST00000598007 1648 ntBASIC15.86■□□□□ 0.13
PDGFAP04085 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDGFAP04085 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.86■□□□□ 0.13
PDGFAP04085 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFAP04085 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PDGFAP04085 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PDGFAP04085 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFAP04085 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.85■□□□□ 0.13
PDGFAP04085 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
PDGFAP04085 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PDGFAP04085 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.85■□□□□ 0.13
PDGFAP04085 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.85■□□□□ 0.13
PDGFAP04085 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PDGFAP04085 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.85■□□□□ 0.13
PDGFAP04085 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFAP04085 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFAP04085 PCDH8P1-201ENST00000428983 2773 ntBASIC15.85■□□□□ 0.13
PDGFAP04085 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.85■□□□□ 0.13
PDGFAP04085 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
PDGFAP04085 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFAP04085 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFAP04085 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFAP04085 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
PDGFAP04085 ADH5P3-201ENST00000433842 1137 ntBASIC15.85■□□□□ 0.13
PDGFAP04085 DDX43P3-201ENST00000441064 443 ntBASIC15.85■□□□□ 0.13
PDGFAP04085 PAWRP1-201ENST00000451083 565 ntBASIC15.85■□□□□ 0.13
PDGFAP04085 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.85■□□□□ 0.13
PDGFAP04085 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.85■□□□□ 0.13
PDGFAP04085 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.85■□□□□ 0.13
PDGFAP04085 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.85■□□□□ 0.13
PDGFAP04085 AC093520.2-201ENST00000561830 333 ntBASIC15.85■□□□□ 0.13
PDGFAP04085 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.85■□□□□ 0.13
PDGFAP04085 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFAP04085 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.85■□□□□ 0.13
PDGFAP04085 AC116407.2-201ENST00000613639 860 ntBASIC15.85■□□□□ 0.13
PDGFAP04085 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PDGFAP04085 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFAP04085 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFAP04085 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFAP04085 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.85■□□□□ 0.13
PDGFAP04085 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.85■□□□□ 0.13
PDGFAP04085 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.85■□□□□ 0.13
PDGFAP04085 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
PDGFAP04085 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFAP04085 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PDGFAP04085 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PDGFAP04085 AC134043.2-201ENST00000624206 2238 ntBASIC15.84■□□□□ 0.13
PDGFAP04085 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.84■□□□□ 0.13
PDGFAP04085 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
PDGFAP04085 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFAP04085 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms