Protein–RNA interactions for Protein: O95409

ZIC2, Zinc finger protein ZIC 2, humanhuman

Predicted RBP Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC2O95409 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC2O95409 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ZIC2O95409 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
ZIC2O95409 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.12■□□□□ 0.17
ZIC2O95409 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC2O95409 AC092053.1-201ENST00000605787 1936 ntBASIC16.11■□□□□ 0.17
ZIC2O95409 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.11■□□□□ 0.17
ZIC2O95409 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
ZIC2O95409 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.11■□□□□ 0.17
ZIC2O95409 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
ZIC2O95409 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
ZIC2O95409 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ZIC2O95409 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.11■□□□□ 0.17
ZIC2O95409 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.11■□□□□ 0.17
ZIC2O95409 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.11■□□□□ 0.17
ZIC2O95409 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ZIC2O95409 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.11■□□□□ 0.17
ZIC2O95409 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.11■□□□□ 0.17
ZIC2O95409 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.11■□□□□ 0.17
ZIC2O95409 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.11■□□□□ 0.17
ZIC2O95409 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ZIC2O95409 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC16.11■□□□□ 0.17
ZIC2O95409 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.11■□□□□ 0.17
ZIC2O95409 NKAPP1-205ENST00000585790 367 ntBASIC16.11■□□□□ 0.17
ZIC2O95409 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.11■□□□□ 0.17
ZIC2O95409 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.11■□□□□ 0.17
ZIC2O95409 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ZIC2O95409 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.11■□□□□ 0.17
ZIC2O95409 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ZIC2O95409 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC2O95409 AC093525.9-201ENST00000624961 1746 ntBASIC16.11■□□□□ 0.17
ZIC2O95409 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.11■□□□□ 0.17
ZIC2O95409 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
ZIC2O95409 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ZIC2O95409 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ZIC2O95409 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.1■□□□□ 0.17
ZIC2O95409 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ZIC2O95409 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ZIC2O95409 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
ZIC2O95409 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.1■□□□□ 0.17
ZIC2O95409 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 BASP1P1-201ENST00000430708 665 ntBASIC16.1■□□□□ 0.17
ZIC2O95409 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.1■□□□□ 0.17
ZIC2O95409 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ZIC2O95409 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.1■□□□□ 0.17
ZIC2O95409 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZIC2O95409 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.09■□□□□ 0.17
ZIC2O95409 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.09■□□□□ 0.17
ZIC2O95409 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.09■□□□□ 0.17
ZIC2O95409 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.09■□□□□ 0.17
ZIC2O95409 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZIC2O95409 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZIC2O95409 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
ZIC2O95409 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZIC2O95409 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.09■□□□□ 0.17
ZIC2O95409 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
ZIC2O95409 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZIC2O95409 NKILA-202ENST00000614771 2598 ntBASIC16.09■□□□□ 0.17
ZIC2O95409 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZIC2O95409 LINC02012-201ENST00000608206 1725 ntBASIC16.09■□□□□ 0.17
ZIC2O95409 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZIC2O95409 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZIC2O95409 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
ZIC2O95409 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms