Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF2O60811 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF2O60811 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF2O60811 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF2O60811 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 KRT18P2-201ENST00000447938 1258 ntBASIC15.9■□□□□ 0.14
PRAMEF2O60811 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF2O60811 PI4KAP1-204ENST00000612579 1703 ntBASIC15.9■□□□□ 0.14
PRAMEF2O60811 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF2O60811 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF2O60811 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF2O60811 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF2O60811 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF2O60811 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEF2O60811 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF2O60811 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF2O60811 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF2O60811 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.89■□□□□ 0.13
PRAMEF2O60811 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 AC004967.1-201ENST00000453589 447 ntBASIC15.89■□□□□ 0.13
PRAMEF2O60811 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 GGTLC5P-201ENST00000617623 998 ntBASIC15.89■□□□□ 0.13
PRAMEF2O60811 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 AC004790.2-201ENST00000623588 572 ntBASIC15.89■□□□□ 0.13
PRAMEF2O60811 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 TUBB8P12-201ENST00000308911 1335 ntBASIC15.89■□□□□ 0.13
PRAMEF2O60811 TUBB7P-202ENST00000428444 1305 ntBASIC15.89■□□□□ 0.13
PRAMEF2O60811 TUBB8P7-204ENST00000567960 1332 ntBASIC15.89■□□□□ 0.13
PRAMEF2O60811 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PRAMEF2O60811 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF2O60811 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF2O60811 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF2O60811 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF2O60811 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF2O60811 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF2O60811 AC002310.6-201ENST00000624451 1377 ntBASIC15.88■□□□□ 0.13
PRAMEF2O60811 AL021920.2-201ENST00000624828 1351 ntBASIC15.88■□□□□ 0.13
PRAMEF2O60811 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF2O60811 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF2O60811 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEF2O60811 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF2O60811 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF2O60811 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF2O60811 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF2O60811 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF2O60811 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF2O60811 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF2O60811 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.88■□□□□ 0.13
PRAMEF2O60811 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PRAMEF2O60811 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEF2O60811 MRPL20P1-201ENST00000400819 433 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms