Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.89■□□□□ 0.13
HCN1O60741 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.89■□□□□ 0.13
HCN1O60741 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
HCN1O60741 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 UBALD1-205ENST00000590891 2641 ntBASIC15.89■□□□□ 0.13
HCN1O60741 AC008894.3-201ENST00000624324 3103 ntBASIC15.89■□□□□ 0.13
HCN1O60741 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HCN1O60741 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
HCN1O60741 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCN1O60741 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.89■□□□□ 0.13
HCN1O60741 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.89■□□□□ 0.13
HCN1O60741 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.88■□□□□ 0.13
HCN1O60741 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HCN1O60741 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 ZNF259P1-201ENST00000407656 1365 ntBASIC15.88■□□□□ 0.13
HCN1O60741 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.88■□□□□ 0.13
HCN1O60741 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 AL020989.1-201ENST00000422979 469 ntBASIC15.88■□□□□ 0.13
HCN1O60741 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.88■□□□□ 0.13
HCN1O60741 RPL13AP23-201ENST00000480739 586 ntBASIC15.88■□□□□ 0.13
HCN1O60741 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.88■□□□□ 0.13
HCN1O60741 AC106730.1-201ENST00000566722 1090 ntBASIC15.88■□□□□ 0.13
HCN1O60741 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.88■□□□□ 0.13
HCN1O60741 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HCN1O60741 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
HCN1O60741 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HCN1O60741 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.88■□□□□ 0.13
HCN1O60741 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
HCN1O60741 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
HCN1O60741 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HCN1O60741 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HCN1O60741 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HCN1O60741 AL049757.1-201ENST00000616842 1596 ntBASIC15.87■□□□□ 0.13
HCN1O60741 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.87■□□□□ 0.13
HCN1O60741 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HCN1O60741 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HCN1O60741 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.87■□□□□ 0.13
HCN1O60741 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCN1O60741 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.87■□□□□ 0.13
HCN1O60741 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.87■□□□□ 0.13
HCN1O60741 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCN1O60741 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HCN1O60741 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
HCN1O60741 AC003669.1-201ENST00000334569 611 ntBASIC15.87■□□□□ 0.13
HCN1O60741 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HCN1O60741 MYCLP1-201ENST00000372451 1075 ntBASIC15.87■□□□□ 0.13
HCN1O60741 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.87■□□□□ 0.13
HCN1O60741 BX005266.1-201ENST00000473402 457 ntBASIC15.87■□□□□ 0.13
HCN1O60741 KRT18P58-201ENST00000527480 1120 ntBASIC15.87■□□□□ 0.13
HCN1O60741 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.87■□□□□ 0.13
HCN1O60741 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.87■□□□□ 0.13
HCN1O60741 AC105339.3-201ENST00000560043 636 ntBASIC15.87■□□□□ 0.13
HCN1O60741 AC117500.6-201ENST00000624871 588 ntBASIC15.87■□□□□ 0.13
HCN1O60741 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCN1O60741 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.87■□□□□ 0.13
HCN1O60741 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.87■□□□□ 0.13
HCN1O60741 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCN1O60741 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HCN1O60741 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.87■□□□□ 0.13
HCN1O60741 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCN1O60741 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HCN1O60741 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.87■□□□□ 0.13
HCN1O60741 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCN1O60741 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HCN1O60741 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HCN1O60741 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCN1O60741 PCDH8P1-201ENST00000428983 2773 ntBASIC15.87■□□□□ 0.13
HCN1O60741 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCN1O60741 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HCN1O60741 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HCN1O60741 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCN1O60741 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCN1O60741 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.86■□□□□ 0.13
HCN1O60741 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HCN1O60741 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCN1O60741 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.86■□□□□ 0.13
HCN1O60741 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.86■□□□□ 0.13
HCN1O60741 MIR574-201ENST00000385209 96 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms