Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.93■□□□□ 0.62
MSH4O15457 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.93■□□□□ 0.62
MSH4O15457 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.93■□□□□ 0.62
MSH4O15457 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MSH4O15457 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.93■□□□□ 0.62
MSH4O15457 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.93■□□□□ 0.62
MSH4O15457 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSH4O15457 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
MSH4O15457 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.92■□□□□ 0.62
MSH4O15457 ELL2P1-201ENST00000413990 1906 ntBASIC18.92■□□□□ 0.62
MSH4O15457 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.92■□□□□ 0.62
MSH4O15457 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.92■□□□□ 0.62
MSH4O15457 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MSH4O15457 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSH4O15457 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
MSH4O15457 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.92■□□□□ 0.62
MSH4O15457 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSH4O15457 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSH4O15457 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSH4O15457 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.92■□□□□ 0.62
MSH4O15457 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.92■□□□□ 0.62
MSH4O15457 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.92■□□□□ 0.62
MSH4O15457 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
MSH4O15457 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
MSH4O15457 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MSH4O15457 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSH4O15457 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSH4O15457 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSH4O15457 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.92■□□□□ 0.62
MSH4O15457 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSH4O15457 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSH4O15457 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.92■□□□□ 0.62
MSH4O15457 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MSH4O15457 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSH4O15457 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSH4O15457 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
MSH4O15457 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.91■□□□□ 0.62
MSH4O15457 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MSH4O15457 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.91■□□□□ 0.62
MSH4O15457 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.91■□□□□ 0.62
MSH4O15457 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 AC002056.1-201ENST00000395613 760 ntBASIC18.91■□□□□ 0.62
MSH4O15457 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.91■□□□□ 0.62
MSH4O15457 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.91■□□□□ 0.62
MSH4O15457 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 AP002490.2-201ENST00000524791 560 ntBASIC18.91■□□□□ 0.62
MSH4O15457 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
MSH4O15457 AC109635.5-201ENST00000533593 962 ntBASIC18.91■□□□□ 0.62
MSH4O15457 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MSH4O15457 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.91■□□□□ 0.62
MSH4O15457 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.91■□□□□ 0.62
MSH4O15457 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 GPALPP1-207ENST00000611650 899 ntBASIC18.91■□□□□ 0.62
MSH4O15457 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
MSH4O15457 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
MSH4O15457 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
MSH4O15457 AC078925.2-201ENST00000624013 1973 ntBASIC18.91■□□□□ 0.62
MSH4O15457 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.91■□□□□ 0.62
MSH4O15457 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.91■□□□□ 0.62
MSH4O15457 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.91■□□□□ 0.62
MSH4O15457 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.91■□□□□ 0.62
MSH4O15457 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSH4O15457 AL603756.1-201ENST00000606511 2163 ntBASIC18.91■□□□□ 0.62
MSH4O15457 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
MSH4O15457 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSH4O15457 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MSH4O15457 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
MSH4O15457 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
MSH4O15457 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSH4O15457 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSH4O15457 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
MSH4O15457 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
MSH4O15457 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSH4O15457 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSH4O15457 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
MSH4O15457 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSH4O15457 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.9■□□□□ 0.62
MSH4O15457 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.9■□□□□ 0.62
MSH4O15457 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.9■□□□□ 0.62
MSH4O15457 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MSH4O15457 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.9■□□□□ 0.62
MSH4O15457 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSH4O15457 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
MSH4O15457 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSH4O15457 AC092474.2-201ENST00000424288 719 ntBASIC18.9■□□□□ 0.62
MSH4O15457 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MSH4O15457 CEND1P1-201ENST00000451006 455 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms