Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.79■□□□□ 0.44
SOX1O00570 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SOX1O00570 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.79■□□□□ 0.44
SOX1O00570 RPL7P3-201ENST00000441388 714 ntBASIC17.79■□□□□ 0.44
SOX1O00570 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX1O00570 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.79■□□□□ 0.44
SOX1O00570 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.79■□□□□ 0.44
SOX1O00570 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.79■□□□□ 0.44
SOX1O00570 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.79■□□□□ 0.44
SOX1O00570 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.79■□□□□ 0.44
SOX1O00570 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX1O00570 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.79■□□□□ 0.44
SOX1O00570 CLK3P2-201ENST00000427566 1453 ntBASIC17.79■□□□□ 0.44
SOX1O00570 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.79■□□□□ 0.44
SOX1O00570 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX1O00570 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.79■□□□□ 0.44
SOX1O00570 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX1O00570 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX1O00570 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SOX1O00570 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SOX1O00570 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SOX1O00570 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
SOX1O00570 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.78■□□□□ 0.44
SOX1O00570 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SOX1O00570 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.78■□□□□ 0.44
SOX1O00570 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.78■□□□□ 0.44
SOX1O00570 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SOX1O00570 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.78■□□□□ 0.44
SOX1O00570 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.78■□□□□ 0.44
SOX1O00570 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.78■□□□□ 0.44
SOX1O00570 EIF4HP1-201ENST00000453115 687 ntBASIC17.78■□□□□ 0.44
SOX1O00570 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.78■□□□□ 0.44
SOX1O00570 PRYP6-201ENST00000514804 343 ntBASIC17.78■□□□□ 0.44
SOX1O00570 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.78■□□□□ 0.44
SOX1O00570 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.78■□□□□ 0.44
SOX1O00570 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.78■□□□□ 0.44
SOX1O00570 AC010328.2-201ENST00000597698 1111 ntBASIC17.78■□□□□ 0.44
SOX1O00570 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.78■□□□□ 0.44
SOX1O00570 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.78■□□□□ 0.44
SOX1O00570 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SOX1O00570 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX1O00570 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.78■□□□□ 0.44
SOX1O00570 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX1O00570 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.77■□□□□ 0.44
SOX1O00570 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX1O00570 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.77■□□□□ 0.44
SOX1O00570 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.77■□□□□ 0.44
SOX1O00570 AC092978.1-202ENST00000637590 1327 ntBASIC17.77■□□□□ 0.44
SOX1O00570 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX1O00570 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.77■□□□□ 0.44
SOX1O00570 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX1O00570 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
SOX1O00570 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SOX1O00570 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.77■□□□□ 0.44
SOX1O00570 AC091046.1-201ENST00000331871 207 ntBASIC17.77■□□□□ 0.44
SOX1O00570 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX1O00570 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.77■□□□□ 0.44
SOX1O00570 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX1O00570 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.77■□□□□ 0.44
SOX1O00570 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.77■□□□□ 0.44
SOX1O00570 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.77■□□□□ 0.44
SOX1O00570 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SOX1O00570 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.77■□□□□ 0.44
SOX1O00570 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SOX1O00570 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SOX1O00570 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SOX1O00570 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.77■□□□□ 0.43
SOX1O00570 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
SOX1O00570 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.43
SOX1O00570 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.77■□□□□ 0.43
SOX1O00570 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SOX1O00570 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX1O00570 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SOX1O00570 HCG11-201ENST00000411553 5696 ntBASIC17.76■□□□□ 0.43
SOX1O00570 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX1O00570 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.76■□□□□ 0.43
SOX1O00570 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SOX1O00570 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX1O00570 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SOX1O00570 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.76■□□□□ 0.43
SOX1O00570 BCRP2-202ENST00000447763 634 ntBASIC17.76■□□□□ 0.43
SOX1O00570 BCRP6-201ENST00000510112 632 ntBASIC17.76■□□□□ 0.43
SOX1O00570 BCRP7-201ENST00000511549 544 ntBASIC17.76■□□□□ 0.43
SOX1O00570 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.76■□□□□ 0.43
SOX1O00570 AP001258.2-201ENST00000529891 490 ntBASIC17.76■□□□□ 0.43
SOX1O00570 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms