Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.05■□□□□ 0.48
O00370 AC078925.2-201ENST00000624013 1973 ntBASIC18.05■□□□□ 0.48
O00370 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
O00370 AL590627.1-203ENST00000421194 1026 ntBASIC18.05■□□□□ 0.48
O00370 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.05■□□□□ 0.48
O00370 AC108751.1-201ENST00000490852 363 ntBASIC18.05■□□□□ 0.48
O00370 OR7E47P-204ENST00000575924 449 ntBASIC18.05■□□□□ 0.48
O00370 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 BX640515.1-201ENST00000617215 977 ntBASIC18.05■□□□□ 0.48
O00370 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
O00370 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.05■□□□□ 0.48
O00370 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
O00370 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.05■□□□□ 0.48
O00370 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
O00370 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.05■□□□□ 0.48
O00370 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
O00370 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
O00370 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.04■□□□□ 0.48
O00370 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.04■□□□□ 0.48
O00370 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
O00370 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.04■□□□□ 0.48
O00370 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.04■□□□□ 0.48
O00370 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
O00370 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 PCDHA14-201ENST00000506751 2298 ntBASIC18.04■□□□□ 0.48
O00370 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.04■□□□□ 0.48
O00370 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.04■□□□□ 0.48
O00370 AC145285.3-201ENST00000564603 959 ntBASIC18.04■□□□□ 0.48
O00370 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.04■□□□□ 0.48
O00370 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 REXO1L3P-201ENST00000622202 1288 ntBASIC18.04■□□□□ 0.48
O00370 AC004790.2-201ENST00000623588 572 ntBASIC18.04■□□□□ 0.48
O00370 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.04■□□□□ 0.48
O00370 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.04■□□□□ 0.48
O00370 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
O00370 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
O00370 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
O00370 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
O00370 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.04■□□□□ 0.48
O00370 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.04■□□□□ 0.48
O00370 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.04■□□□□ 0.48
O00370 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
O00370 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.03■□□□□ 0.48
O00370 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.03■□□□□ 0.48
O00370 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.03■□□□□ 0.48
O00370 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
O00370 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
O00370 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
O00370 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
O00370 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
O00370 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
O00370 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
O00370 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.03■□□□□ 0.48
O00370 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.03■□□□□ 0.48
O00370 MRPL20P1-201ENST00000400819 433 ntBASIC18.03■□□□□ 0.48
O00370 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
O00370 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.03■□□□□ 0.48
O00370 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.03■□□□□ 0.48
O00370 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
O00370 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.03■□□□□ 0.48
O00370 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
O00370 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.03■□□□□ 0.48
O00370 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.03■□□□□ 0.48
O00370 Z83851.2-201ENST00000609564 659 ntBASIC18.03■□□□□ 0.48
O00370 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
O00370 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
O00370 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
O00370 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
O00370 AC079328.2-201ENST00000561241 3354 ntBASIC18.03■□□□□ 0.48
O00370 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
O00370 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.03■□□□□ 0.48
O00370 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
O00370 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.03■□□□□ 0.48
O00370 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
O00370 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.03■□□□□ 0.48
O00370 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
O00370 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
O00370 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms