Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC7O00311 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CDC7O00311 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC7O00311 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC7O00311 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC7O00311 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC7O00311 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDC7O00311 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC7O00311 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDC7O00311 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CDC7O00311 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CDC7O00311 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC7O00311 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 PCDH8P1-201ENST00000428983 2773 ntBASIC16.61■□□□□ 0.25
CDC7O00311 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDC7O00311 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDC7O00311 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDC7O00311 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC7O00311 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CDC7O00311 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDC7O00311 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.61■□□□□ 0.25
CDC7O00311 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.61■□□□□ 0.25
CDC7O00311 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.61■□□□□ 0.25
CDC7O00311 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.61■□□□□ 0.25
CDC7O00311 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC7O00311 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC7O00311 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC7O00311 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDC7O00311 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDC7O00311 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC7O00311 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC7O00311 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC7O00311 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.61■□□□□ 0.25
CDC7O00311 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDC7O00311 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC7O00311 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDC7O00311 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDC7O00311 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CDC7O00311 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC7O00311 PI4KAP1-204ENST00000612579 1703 ntBASIC16.6■□□□□ 0.25
CDC7O00311 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.6■□□□□ 0.25
CDC7O00311 RPS2P1-201ENST00000434010 821 ntBASIC16.6■□□□□ 0.25
CDC7O00311 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.6■□□□□ 0.25
CDC7O00311 EMBP1-201ENST00000458200 901 ntBASIC16.6■□□□□ 0.25
CDC7O00311 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC7O00311 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC7O00311 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC7O00311 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.6■□□□□ 0.25
CDC7O00311 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CDC7O00311 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDC7O00311 AC107918.4-202ENST00000641623 219 ntBASIC16.6■□□□□ 0.25
CDC7O00311 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC7O00311 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CDC7O00311 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDC7O00311 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDC7O00311 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CDC7O00311 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDC7O00311 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC7O00311 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC7O00311 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC7O00311 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC7O00311 AC018695.7-201ENST00000624587 2492 ntBASIC16.59■□□□□ 0.25
CDC7O00311 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.59■□□□□ 0.25
CDC7O00311 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDC7O00311 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC7O00311 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC7O00311 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms