Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 HMGA1P7-201ENST00000406908 502 ntBASIC19.01■□□□□ 0.63
DDX39AO00148 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.01■□□□□ 0.63
DDX39AO00148 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.01■□□□□ 0.63
DDX39AO00148 DNAJB3-202ENST00000449667 1266 ntBASIC19.01■□□□□ 0.63
DDX39AO00148 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.01■□□□□ 0.63
DDX39AO00148 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX39AO00148 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.01■□□□□ 0.63
DDX39AO00148 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
DDX39AO00148 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX39AO00148 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
DDX39AO00148 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
DDX39AO00148 AL021920.2-201ENST00000624828 1351 ntBASIC19.01■□□□□ 0.63
DDX39AO00148 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX39AO00148 AL353732.1-201ENST00000569618 1459 ntBASIC19.01■□□□□ 0.63
DDX39AO00148 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX39AO00148 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX39AO00148 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX39AO00148 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX39AO00148 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
DDX39AO00148 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
DDX39AO00148 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
DDX39AO00148 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19■□□□□ 0.63
DDX39AO00148 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19■□□□□ 0.63
DDX39AO00148 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
DDX39AO00148 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19■□□□□ 0.63
DDX39AO00148 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19■□□□□ 0.63
DDX39AO00148 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19■□□□□ 0.63
DDX39AO00148 AC092902.6-201ENST00000641783 218 ntBASIC19■□□□□ 0.63
DDX39AO00148 AL645728.2-201ENST00000641974 660 ntBASIC19■□□□□ 0.63
DDX39AO00148 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
DDX39AO00148 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX39AO00148 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19■□□□□ 0.63
DDX39AO00148 KRT8P49-201ENST00000604166 1432 ntBASIC19■□□□□ 0.63
DDX39AO00148 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX39AO00148 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
DDX39AO00148 LETM1P2-201ENST00000597330 2178 ntBASIC18.99■□□□□ 0.63
DDX39AO00148 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX39AO00148 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX39AO00148 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
DDX39AO00148 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX39AO00148 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX39AO00148 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX39AO00148 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX39AO00148 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
DDX39AO00148 MKNK2P1-201ENST00000437526 628 ntBASIC18.99■□□□□ 0.63
DDX39AO00148 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX39AO00148 YBX1P5-201ENST00000509441 847 ntBASIC18.99■□□□□ 0.63
DDX39AO00148 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.99■□□□□ 0.63
DDX39AO00148 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX39AO00148 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.99■□□□□ 0.63
DDX39AO00148 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX39AO00148 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX39AO00148 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX39AO00148 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX39AO00148 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX39AO00148 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
DDX39AO00148 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
DDX39AO00148 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
DDX39AO00148 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX39AO00148 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX39AO00148 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.99■□□□□ 0.63
DDX39AO00148 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX39AO00148 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
DDX39AO00148 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX39AO00148 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX39AO00148 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX39AO00148 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX39AO00148 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX39AO00148 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX39AO00148 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX39AO00148 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX39AO00148 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX39AO00148 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX39AO00148 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
DDX39AO00148 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.98■□□□□ 0.63
DDX39AO00148 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.98■□□□□ 0.63
DDX39AO00148 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
DDX39AO00148 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.98■□□□□ 0.63
DDX39AO00148 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.98■□□□□ 0.63
DDX39AO00148 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
DDX39AO00148 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
DDX39AO00148 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.98■□□□□ 0.63
DDX39AO00148 AC124947.2-201ENST00000547118 1133 ntBASIC18.98■□□□□ 0.63
DDX39AO00148 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
DDX39AO00148 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms