Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 AC026150.2-201ENST00000564693 1156 ntBASIC19.55■□□□□ 0.72
USP17L11C9JVI0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 U1.21-201ENST00000580816 167 ntBASIC19.55■□□□□ 0.72
USP17L11C9JVI0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 SLC22A20-204ENST00000530038 1673 ntBASIC19.55■□□□□ 0.72
USP17L11C9JVI0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP17L11C9JVI0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 AC138932.1-201ENST00000534164 6830 ntBASIC19.54■□□□□ 0.72
USP17L11C9JVI0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 BASP1P1-201ENST00000430708 665 ntBASIC19.54■□□□□ 0.72
USP17L11C9JVI0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 AL031055.1-201ENST00000606362 631 ntBASIC19.54■□□□□ 0.72
USP17L11C9JVI0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L11C9JVI0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 AC107890.1-201ENST00000422478 521 ntBASIC19.53■□□□□ 0.72
USP17L11C9JVI0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 SPDYE14P-201ENST00000442619 822 ntBASIC19.53■□□□□ 0.72
USP17L11C9JVI0 AC087641.1-201ENST00000557561 1021 ntBASIC19.53■□□□□ 0.72
USP17L11C9JVI0 MIR3909-201ENST00000579518 119 ntBASIC19.53■□□□□ 0.72
USP17L11C9JVI0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
USP17L11C9JVI0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.52■□□□□ 0.72
USP17L11C9JVI0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 SPDYE7P-202ENST00000420373 878 ntBASIC19.52■□□□□ 0.72
USP17L11C9JVI0 AC125807.1-201ENST00000483097 614 ntBASIC19.52■□□□□ 0.72
USP17L11C9JVI0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 AC008267.7-201ENST00000624570 1194 ntBASIC19.52■□□□□ 0.72
USP17L11C9JVI0 AP001350.2-201ENST00000625104 1094 ntBASIC19.52■□□□□ 0.72
USP17L11C9JVI0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms