Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HFM1A2PYH4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
HFM1A2PYH4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
HFM1A2PYH4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 KRT18P34-201ENST00000488218 1270 ntBASIC24.78■■□□□ 1.56
HFM1A2PYH4 PRYP6-201ENST00000514804 343 ntBASIC24.78■■□□□ 1.56
HFM1A2PYH4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HFM1A2PYH4 AP001059.3-201ENST00000619053 235 ntBASIC24.78■■□□□ 1.56
HFM1A2PYH4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HFM1A2PYH4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
HFM1A2PYH4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HFM1A2PYH4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HFM1A2PYH4 AR-207ENST00000612010 3896 ntTSL 5 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HFM1A2PYH4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
HFM1A2PYH4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HFM1A2PYH4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 AL512356.2-201ENST00000546955 174 ntBASIC24.78■■□□□ 1.56
HFM1A2PYH4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC24.78■■□□□ 1.56
HFM1A2PYH4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
HFM1A2PYH4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HFM1A2PYH4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC24.77■■□□□ 1.56
HFM1A2PYH4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HFM1A2PYH4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
HFM1A2PYH4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC24.77■■□□□ 1.56
HFM1A2PYH4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HFM1A2PYH4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
HFM1A2PYH4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HFM1A2PYH4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HFM1A2PYH4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HFM1A2PYH4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HFM1A2PYH4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC24.77■■□□□ 1.56
HFM1A2PYH4 SLC25A39P2-201ENST00000537614 270 ntBASIC24.77■■□□□ 1.56
HFM1A2PYH4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
HFM1A2PYH4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC24.77■■□□□ 1.56
HFM1A2PYH4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC24.77■■□□□ 1.56
HFM1A2PYH4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC24.77■■□□□ 1.56
HFM1A2PYH4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HFM1A2PYH4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HFM1A2PYH4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HFM1A2PYH4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
HFM1A2PYH4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC24.76■■□□□ 1.55
HFM1A2PYH4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
HFM1A2PYH4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 GGT3P-204ENST00000453783 1664 ntBASIC24.76■■□□□ 1.55
HFM1A2PYH4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 AC022211.2-201ENST00000585075 2527 ntBASIC24.76■■□□□ 1.55
HFM1A2PYH4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC24.76■■□□□ 1.55
HFM1A2PYH4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
HFM1A2PYH4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
HFM1A2PYH4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC24.76■■□□□ 1.55
HFM1A2PYH4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC24.76■■□□□ 1.55
HFM1A2PYH4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC24.76■■□□□ 1.55
HFM1A2PYH4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC24.76■■□□□ 1.55
HFM1A2PYH4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC24.76■■□□□ 1.55
HFM1A2PYH4 LINC00628-201ENST00000628516 1289 ntBASIC24.76■■□□□ 1.55
HFM1A2PYH4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC24.76■■□□□ 1.55
HFM1A2PYH4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
HFM1A2PYH4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
HFM1A2PYH4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HFM1A2PYH4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
HFM1A2PYH4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC24.75■■□□□ 1.55
HFM1A2PYH4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HFM1A2PYH4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
HFM1A2PYH4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
HFM1A2PYH4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HFM1A2PYH4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC24.75■■□□□ 1.55
HFM1A2PYH4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
HFM1A2PYH4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HFM1A2PYH4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC24.75■■□□□ 1.55
HFM1A2PYH4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC24.75■■□□□ 1.55
HFM1A2PYH4 AC005237.2-201ENST00000434368 219 ntBASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms