Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 FAM220CP-201ENST00000395253 831 ntBASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 AC092597.1-201ENST00000487352 616 ntBASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 AC005332.3-201ENST00000589904 676 ntBASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 AL138831.2-201ENST00000606564 490 ntBASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 AC132938.5-201ENST00000624980 1813 ntBASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 AC003669.1-201ENST00000334569 611 ntBASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 AC006277.1-201ENST00000624348 1610 ntBASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TCRBV3S1A0A5B6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 LINC02228-204ENST00000642115 2962 ntBASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 STARP1-201ENST00000397973 869 ntBASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.85■□□□□ 0.13
TCRBV3S1A0A5B6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms