Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 AP002414.1-201ENST00000391405 1147 ntBASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 SNHG9-202ENST00000564014 471 ntBASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 TUBB8P12-201ENST00000308911 1335 ntBASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 TUBB7P-202ENST00000428444 1305 ntBASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 TUBB8P7-204ENST00000567960 1332 ntBASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 HTR5BP-201ENST00000430851 1154 ntBASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 AC092865.6-201ENST00000642101 219 ntBASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 AC105020.1-201ENST00000435356 2205 ntBASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 AC092068.3-201ENST00000587894 2016 ntBASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDHB1Q9Y5F3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 CYMP-203ENST00000474680 1263 ntBASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 YBX1P5-201ENST00000509441 847 ntBASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 RFPL4AP1-201ENST00000530883 850 ntBASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 PCDHA12-202ENST00000613593 2588 ntBASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms