Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 KRT16P5-201ENST00000455284 522 ntBASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC12.25□□□□□ -0.45
CHTOPQ9Y3Y2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 MIR638-201ENST00000385237 100 ntBASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 NIFKP9-201ENST00000419265 221 ntBASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 MYC-209ENST00000641252 345 ntBASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CHTOPQ9Y3Y2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 AL365203.3-201ENST00000609742 2057 ntBASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 KRT8P9-201ENST00000558927 1449 ntBASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 AC092364.2-201ENST00000596710 2692 ntBASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.23□□□□□ -0.45
CHTOPQ9Y3Y2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms