Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF6Q9Y252 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF6Q9Y252 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF6Q9Y252 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF6Q9Y252 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF6Q9Y252 RNF216P1-203ENST00000404404 2427 ntBASIC16.02■□□□□ 0.16
RNF6Q9Y252 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RNF6Q9Y252 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF6Q9Y252 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF6Q9Y252 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF6Q9Y252 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RNF6Q9Y252 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF6Q9Y252 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF6Q9Y252 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.02■□□□□ 0.16
RNF6Q9Y252 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF6Q9Y252 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.02■□□□□ 0.16
RNF6Q9Y252 AC073648.2-201ENST00000510116 352 ntBASIC16.02■□□□□ 0.16
RNF6Q9Y252 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF6Q9Y252 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RNF6Q9Y252 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF6Q9Y252 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF6Q9Y252 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.02■□□□□ 0.15
RNF6Q9Y252 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RNF6Q9Y252 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF6Q9Y252 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF6Q9Y252 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.02■□□□□ 0.15
RNF6Q9Y252 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RNF6Q9Y252 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RNF6Q9Y252 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.02■□□□□ 0.15
RNF6Q9Y252 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF6Q9Y252 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RNF6Q9Y252 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF6Q9Y252 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF6Q9Y252 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF6Q9Y252 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF6Q9Y252 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 AC018712.1-201ENST00000455767 687 ntBASIC16.01■□□□□ 0.15
RNF6Q9Y252 FGFR3P6-201ENST00000457012 610 ntBASIC16.01■□□□□ 0.15
RNF6Q9Y252 RNPS1P1-201ENST00000507437 918 ntBASIC16.01■□□□□ 0.15
RNF6Q9Y252 AC009533.2-201ENST00000543664 586 ntBASIC16.01■□□□□ 0.15
RNF6Q9Y252 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF6Q9Y252 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 MTDHP3-201ENST00000594186 672 ntBASIC16.01■□□□□ 0.15
RNF6Q9Y252 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.01■□□□□ 0.15
RNF6Q9Y252 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 LINC02012-201ENST00000608206 1725 ntBASIC16.01■□□□□ 0.15
RNF6Q9Y252 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF6Q9Y252 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF6Q9Y252 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF6Q9Y252 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF6Q9Y252 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF6Q9Y252 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF6Q9Y252 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF6Q9Y252 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF6Q9Y252 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RNF6Q9Y252 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RNF6Q9Y252 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16■□□□□ 0.15
RNF6Q9Y252 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16■□□□□ 0.15
RNF6Q9Y252 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16■□□□□ 0.15
RNF6Q9Y252 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF6Q9Y252 AC243591.1-201ENST00000452967 1364 ntBASIC16■□□□□ 0.15
RNF6Q9Y252 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16■□□□□ 0.15
RNF6Q9Y252 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RNF6Q9Y252 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RNF6Q9Y252 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
RNF6Q9Y252 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RNF6Q9Y252 PCDHB17P-201ENST00000539533 2393 ntBASIC16■□□□□ 0.15
RNF6Q9Y252 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF6Q9Y252 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16■□□□□ 0.15
RNF6Q9Y252 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF6Q9Y252 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16■□□□□ 0.15
RNF6Q9Y252 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF6Q9Y252 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RNF6Q9Y252 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16■□□□□ 0.15
RNF6Q9Y252 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16■□□□□ 0.15
RNF6Q9Y252 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16■□□□□ 0.15
RNF6Q9Y252 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16■□□□□ 0.15
RNF6Q9Y252 KRT18P13-201ENST00000400056 1290 ntBASIC16■□□□□ 0.15
RNF6Q9Y252 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF6Q9Y252 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16■□□□□ 0.15
RNF6Q9Y252 RBM17P3-201ENST00000417687 1192 ntBASIC16■□□□□ 0.15
RNF6Q9Y252 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16■□□□□ 0.15
RNF6Q9Y252 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF6Q9Y252 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16■□□□□ 0.15
RNF6Q9Y252 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16■□□□□ 0.15
RNF6Q9Y252 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms