Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 RN7SL399P-201ENST00000471648 279 ntBASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RIMBP3Q9UFD9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 DEF8-202ENST00000418391 852 ntTSL 2 BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RIMBP3Q9UFD9 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 PFN2-215ENST00000497148 743 ntTSL 4 BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 AC036164.1-201ENST00000570544 333 ntBASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RIMBP3Q9UFD9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
RIMBP3Q9UFD9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RIMBP3Q9UFD9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC26.33■■□□□ 1.8
RIMBP3Q9UFD9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC26.33■■□□□ 1.8
RIMBP3Q9UFD9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 CFL1-214ENST00000534769 758 ntTSL 2 BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RIMBP3Q9UFD9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 SNX21-203ENST00000372541 771 ntTSL 2 BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 AC069218.1-201ENST00000435269 762 ntBASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 MTX1P1-201ENST00000440904 838 ntBASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 RN7SL720P-201ENST00000488178 304 ntBASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 AC245884.6-201ENST00000515672 1067 ntBASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 NDUFV2P1-201ENST00000596415 907 ntBASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC26.31■■□□□ 1.8
RIMBP3Q9UFD9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 MAGEA5-201ENST00000446757 942 ntBASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC26.3■■□□□ 1.8
RIMBP3Q9UFD9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms