Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 FAM185BP-201ENST00000443595 716 ntBASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 ACTG1P14-201ENST00000446382 1122 ntBASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 AC092902.6-201ENST00000641783 218 ntBASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 AC018695.7-201ENST00000624587 2492 ntBASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HDAC6Q9UBN7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HDAC6Q9UBN7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HDAC6Q9UBN7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.14■□□□□ 0.66
HDAC6Q9UBN7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.14■□□□□ 0.66
HDAC6Q9UBN7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.14■□□□□ 0.66
HDAC6Q9UBN7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
HDAC6Q9UBN7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HDAC6Q9UBN7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC6Q9UBN7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 BCL2-203ENST00000589955 5011 ntBASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 AL118508.1-201ENST00000613502 2345 ntBASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC6Q9UBN7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDAC6Q9UBN7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms