Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 AC104640.1-201ENST00000562617 2109 ntBASIC18.95■□□□□ 0.62
CBX8Q9HC52 AL603832.2-201ENST00000566195 2125 ntBASIC18.95■□□□□ 0.62
CBX8Q9HC52 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CBX8Q9HC52 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CBX8Q9HC52 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CBX8Q9HC52 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.94■□□□□ 0.62
CBX8Q9HC52 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CBX8Q9HC52 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.94■□□□□ 0.62
CBX8Q9HC52 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CBX8Q9HC52 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.94■□□□□ 0.62
CBX8Q9HC52 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX8Q9HC52 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.93■□□□□ 0.62
CBX8Q9HC52 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.93■□□□□ 0.62
CBX8Q9HC52 AC010491.1-201ENST00000563101 2797 ntBASIC18.93■□□□□ 0.62
CBX8Q9HC52 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 TSPY5P-201ENST00000426936 936 ntBASIC18.93■□□□□ 0.62
CBX8Q9HC52 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.93■□□□□ 0.62
CBX8Q9HC52 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CBX8Q9HC52 AC073592.5-201ENST00000624854 528 ntBASIC18.93■□□□□ 0.62
CBX8Q9HC52 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.93■□□□□ 0.62
CBX8Q9HC52 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.93■□□□□ 0.62
CBX8Q9HC52 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CBX8Q9HC52 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CBX8Q9HC52 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX8Q9HC52 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBX8Q9HC52 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.92■□□□□ 0.62
CBX8Q9HC52 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBX8Q9HC52 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBX8Q9HC52 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.92■□□□□ 0.62
CBX8Q9HC52 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBX8Q9HC52 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CBX8Q9HC52 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CBX8Q9HC52 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CBX8Q9HC52 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBX8Q9HC52 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CBX8Q9HC52 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.92■□□□□ 0.62
CBX8Q9HC52 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBX8Q9HC52 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
CBX8Q9HC52 NUS1P1-201ENST00000446295 882 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms