Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PIF1Q9H611 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PIF1Q9H611 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.26■□□□□ 0.19
PIF1Q9H611 AL049757.1-201ENST00000616842 1596 ntBASIC16.26■□□□□ 0.19
PIF1Q9H611 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.26■□□□□ 0.19
PIF1Q9H611 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PIF1Q9H611 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.26■□□□□ 0.19
PIF1Q9H611 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.26■□□□□ 0.19
PIF1Q9H611 ALOX12P2-203ENST00000570921 1945 ntBASIC16.26■□□□□ 0.19
PIF1Q9H611 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.26■□□□□ 0.19
PIF1Q9H611 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.26■□□□□ 0.19
PIF1Q9H611 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.26■□□□□ 0.19
PIF1Q9H611 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.26■□□□□ 0.19
PIF1Q9H611 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PIF1Q9H611 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.26■□□□□ 0.19
PIF1Q9H611 HYMAI.1-201ENST00000620949 238 ntBASIC16.26■□□□□ 0.19
PIF1Q9H611 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.26■□□□□ 0.19
PIF1Q9H611 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.26■□□□□ 0.19
PIF1Q9H611 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PIF1Q9H611 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PIF1Q9H611 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PIF1Q9H611 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.25■□□□□ 0.19
PIF1Q9H611 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
PIF1Q9H611 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.25■□□□□ 0.19
PIF1Q9H611 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.25■□□□□ 0.19
PIF1Q9H611 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PIF1Q9H611 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.25■□□□□ 0.19
PIF1Q9H611 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.25■□□□□ 0.19
PIF1Q9H611 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.25■□□□□ 0.19
PIF1Q9H611 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.25■□□□□ 0.19
PIF1Q9H611 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PIF1Q9H611 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.25■□□□□ 0.19
PIF1Q9H611 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.25■□□□□ 0.19
PIF1Q9H611 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.25■□□□□ 0.19
PIF1Q9H611 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PIF1Q9H611 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PIF1Q9H611 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.25■□□□□ 0.19
PIF1Q9H611 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PIF1Q9H611 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.24■□□□□ 0.19
PIF1Q9H611 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 AL135999.2-201ENST00000622438 1686 ntBASIC16.24■□□□□ 0.19
PIF1Q9H611 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.24■□□□□ 0.19
PIF1Q9H611 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.24■□□□□ 0.19
PIF1Q9H611 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.24■□□□□ 0.19
PIF1Q9H611 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.24■□□□□ 0.19
PIF1Q9H611 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.24■□□□□ 0.19
PIF1Q9H611 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 AL671277.2-201ENST00000458060 996 ntBASIC16.24■□□□□ 0.19
PIF1Q9H611 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PIF1Q9H611 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.24■□□□□ 0.19
PIF1Q9H611 AC111152.3-201ENST00000569699 673 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms