Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.93■□□□□ 0.78
RNF41Q9H4P4 AL513190.1-201ENST00000621254 727 ntBASIC19.93■□□□□ 0.78
RNF41Q9H4P4 AC092865.6-201ENST00000642101 219 ntBASIC19.93■□□□□ 0.78
RNF41Q9H4P4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 AC012313.1-201ENST00000593393 3059 ntBASIC19.93■□□□□ 0.78
RNF41Q9H4P4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 AC105020.1-201ENST00000435356 2205 ntBASIC19.92■□□□□ 0.78
RNF41Q9H4P4 OR6D1P-203ENST00000641209 4860 ntBASIC19.92■□□□□ 0.78
RNF41Q9H4P4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF41Q9H4P4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 HMGA1P7-201ENST00000406908 502 ntBASIC19.91■□□□□ 0.78
RNF41Q9H4P4 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 AC074386.1-202ENST00000463561 864 ntBASIC19.91■□□□□ 0.78
RNF41Q9H4P4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 CYP2A7P1-201ENST00000595391 815 ntBASIC19.91■□□□□ 0.78
RNF41Q9H4P4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 AC005915.1-201ENST00000624912 2018 ntBASIC19.91■□□□□ 0.78
RNF41Q9H4P4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF41Q9H4P4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 AL391256.1-201ENST00000443260 1855 ntBASIC19.9■□□□□ 0.78
RNF41Q9H4P4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms