Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 FAM86GP-201ENST00000448322 971 ntBASIC17.6■□□□□ 0.41
LRRC3Q9BY71 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 DUX4L27-201ENST00000554796 1261 ntBASIC17.6■□□□□ 0.41
LRRC3Q9BY71 KRT8P23-201ENST00000560090 1207 ntBASIC17.6■□□□□ 0.41
LRRC3Q9BY71 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 AL031055.1-201ENST00000606362 631 ntBASIC17.6■□□□□ 0.41
LRRC3Q9BY71 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 WASH6P-202ENST00000359512 1437 ntBASIC17.6■□□□□ 0.41
LRRC3Q9BY71 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC3Q9BY71 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 AC069262.1-201ENST00000539058 672 ntBASIC17.59■□□□□ 0.41
LRRC3Q9BY71 AC087641.1-201ENST00000557561 1021 ntBASIC17.59■□□□□ 0.41
LRRC3Q9BY71 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 MIR4492-201ENST00000581627 80 ntBASIC17.59■□□□□ 0.41
LRRC3Q9BY71 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC3Q9BY71 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
LRRC3Q9BY71 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC3Q9BY71 AC131009.4-201ENST00000624048 1740 ntBASIC17.58■□□□□ 0.41
LRRC3Q9BY71 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
LRRC3Q9BY71 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
LRRC3Q9BY71 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.58■□□□□ 0.41
LRRC3Q9BY71 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms