Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 PRYP6-201ENST00000514804 343 ntBASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 API5-211ENST00000534695 560 ntTSL 5 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 AC116353.5-201ENST00000638148 1699 ntBASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 ARSEP1-201ENST00000420443 635 ntBASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.36■□□□□ 0.85
RTFDC1Q9BY42 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 RPL37AP1-201ENST00000412502 279 ntBASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 HLA-V-201ENST00000429037 534 ntBASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 BANF1P1-201ENST00000553684 263 ntBASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTFDC1Q9BY42 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 AL353705.2-201ENST00000428243 662 ntBASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 AL353779.1-201ENST00000434793 351 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms