Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.05■□□□□ -0
VRK1Q99986 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.05■□□□□ -0
VRK1Q99986 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
VRK1Q99986 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
VRK1Q99986 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.04■□□□□ -0
VRK1Q99986 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.04■□□□□ -0
VRK1Q99986 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.04■□□□□ -0
VRK1Q99986 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
VRK1Q99986 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.04■□□□□ -0
VRK1Q99986 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
VRK1Q99986 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.04■□□□□ -0
VRK1Q99986 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
VRK1Q99986 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
VRK1Q99986 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.04■□□□□ -0
VRK1Q99986 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.04■□□□□ -0
VRK1Q99986 AC139887.3-201ENST00000568585 713 ntBASIC15.04■□□□□ -0
VRK1Q99986 NKAPP1-205ENST00000585790 367 ntBASIC15.04■□□□□ -0
VRK1Q99986 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.04■□□□□ -0
VRK1Q99986 AL049840.3-201ENST00000602669 611 ntBASIC15.04■□□□□ -0
VRK1Q99986 AL139288.1-201ENST00000623748 933 ntBASIC15.04■□□□□ -0
VRK1Q99986 FAM215A-202ENST00000632077 792 ntBASIC15.04■□□□□ -0
VRK1Q99986 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
VRK1Q99986 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.04■□□□□ -0
VRK1Q99986 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK1Q99986 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.03■□□□□ -0
VRK1Q99986 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.03■□□□□ -0
VRK1Q99986 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
VRK1Q99986 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
VRK1Q99986 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.03■□□□□ -0
VRK1Q99986 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.03■□□□□ -0
VRK1Q99986 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.03■□□□□ -0
VRK1Q99986 AC103564.2-201ENST00000432853 1299 ntBASIC15.03■□□□□ -0
VRK1Q99986 HNRNPDP1-201ENST00000439535 754 ntBASIC15.03■□□□□ -0
VRK1Q99986 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.03■□□□□ -0
VRK1Q99986 AC122714.2-201ENST00000502787 707 ntBASIC15.03■□□□□ -0
VRK1Q99986 RNA5SP419-201ENST00000515908 135 ntBASIC15.03■□□□□ -0
VRK1Q99986 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.03■□□□□ -0
VRK1Q99986 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.03■□□□□ -0
VRK1Q99986 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK1Q99986 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.03■□□□□ -0
VRK1Q99986 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.03■□□□□ -0
VRK1Q99986 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
VRK1Q99986 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.03■□□□□ -0
VRK1Q99986 MTDHP4-201ENST00000600287 670 ntBASIC15.03■□□□□ -0
VRK1Q99986 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.03■□□□□ -0
VRK1Q99986 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.03■□□□□ -0
VRK1Q99986 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms