Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.94■□□□□ 0.46
RAD9AQ99638 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAD9AQ99638 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAD9AQ99638 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RAD9AQ99638 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
RAD9AQ99638 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.94■□□□□ 0.46
RAD9AQ99638 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.94■□□□□ 0.46
RAD9AQ99638 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.94■□□□□ 0.46
RAD9AQ99638 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.94■□□□□ 0.46
RAD9AQ99638 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.94■□□□□ 0.46
RAD9AQ99638 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
RAD9AQ99638 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RAD9AQ99638 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RAD9AQ99638 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAD9AQ99638 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.94■□□□□ 0.46
RAD9AQ99638 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAD9AQ99638 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAD9AQ99638 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.94■□□□□ 0.46
RAD9AQ99638 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAD9AQ99638 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RAD9AQ99638 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD9AQ99638 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD9AQ99638 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.93■□□□□ 0.46
RAD9AQ99638 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RAD9AQ99638 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD9AQ99638 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RAD9AQ99638 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RAD9AQ99638 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAD9AQ99638 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.93■□□□□ 0.46
RAD9AQ99638 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD9AQ99638 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
RAD9AQ99638 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD9AQ99638 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RAD9AQ99638 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RAD9AQ99638 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAD9AQ99638 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.93■□□□□ 0.46
RAD9AQ99638 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD9AQ99638 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.93■□□□□ 0.46
RAD9AQ99638 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.93■□□□□ 0.46
RAD9AQ99638 RPL37AP1-201ENST00000412502 279 ntBASIC17.93■□□□□ 0.46
RAD9AQ99638 MTND6P24-201ENST00000440466 518 ntBASIC17.93■□□□□ 0.46
RAD9AQ99638 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.93■□□□□ 0.46
RAD9AQ99638 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAD9AQ99638 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.93■□□□□ 0.46
RAD9AQ99638 PRYP6-201ENST00000514804 343 ntBASIC17.93■□□□□ 0.46
RAD9AQ99638 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.93■□□□□ 0.46
RAD9AQ99638 HILS1-202ENST00000545329 423 ntBASIC17.93■□□□□ 0.46
RAD9AQ99638 RN7SL828P-201ENST00000607615 303 ntBASIC17.93■□□□□ 0.46
RAD9AQ99638 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.93■□□□□ 0.46
RAD9AQ99638 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RAD9AQ99638 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAD9AQ99638 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RAD9AQ99638 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAD9AQ99638 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RAD9AQ99638 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD9AQ99638 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD9AQ99638 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD9AQ99638 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.93■□□□□ 0.46
RAD9AQ99638 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RAD9AQ99638 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.93■□□□□ 0.46
RAD9AQ99638 FOXO1B-201ENST00000504678 1527 ntBASIC17.93■□□□□ 0.46
RAD9AQ99638 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RAD9AQ99638 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD9AQ99638 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD9AQ99638 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD9AQ99638 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD9AQ99638 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RAD9AQ99638 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD9AQ99638 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RAD9AQ99638 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.92■□□□□ 0.46
RAD9AQ99638 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD9AQ99638 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD9AQ99638 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAD9AQ99638 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.92■□□□□ 0.46
RAD9AQ99638 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.92■□□□□ 0.46
RAD9AQ99638 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.92■□□□□ 0.46
RAD9AQ99638 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.92■□□□□ 0.46
RAD9AQ99638 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.92■□□□□ 0.46
RAD9AQ99638 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAD9AQ99638 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.92■□□□□ 0.46
RAD9AQ99638 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.92■□□□□ 0.46
RAD9AQ99638 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.92■□□□□ 0.46
RAD9AQ99638 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.92■□□□□ 0.46
RAD9AQ99638 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.92■□□□□ 0.46
RAD9AQ99638 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.92■□□□□ 0.46
RAD9AQ99638 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.92■□□□□ 0.46
RAD9AQ99638 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.92■□□□□ 0.46
RAD9AQ99638 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.92■□□□□ 0.46
RAD9AQ99638 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RAD9AQ99638 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RAD9AQ99638 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.92■□□□□ 0.46
RAD9AQ99638 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.92■□□□□ 0.46
RAD9AQ99638 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RAD9AQ99638 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.92■□□□□ 0.46
RAD9AQ99638 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
RAD9AQ99638 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD9AQ99638 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD9AQ99638 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.92■□□□□ 0.46
RAD9AQ99638 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
RAD9AQ99638 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms